FFCP PHASE1:Hg19::chr7:100163531..100163535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3268 | |EntrezGene=3268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5177 | |HGNC=5177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_BC047227_5end | |association_with_transcript=47bp_to_BC047227_5end | ||
|cluster_id=chr7:100163531..100163535,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_3_at_AGFG2_5end | |description=CAGE_peak_3_at_AGFG2_5end | ||
|id=chr7:100163531..100163535,+ | |id=chr7:100163531..100163535,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.60e-12;12!CL:0002138;3.60e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.80e-12,12;CL:0000115,3.24e-07,36;CL:0005020,3.66e-07,6;CL:0002138,3.66e-07,6;CL:0005022,3.66e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;3.60e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-10!115;UBERON:0001049!2.34e-07!57;UBERON:0005068!2.34e-07!57;UBERON:0006241!2.34e-07!57;UBERON:0007135!2.34e-07!57;UBERON:0000477!3.41e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.53e-08;19!UBERON:0006925;1.53e-08;19!UBERON:0002365;9.69e-08;31!UBERON:0002330;9.69e-08;31!UBERON:0002423;4.63e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.81e-08,19;UBERON:0006925,1.81e-08,19;UBERON:0008836,1.81e-08,19;UBERON:0008835,2.01e-08,22;UBERON:0003894,2.01e-08,22;UBERON:0007499,2.17e-08,25;UBERON:0001041,4.71e-08,87;UBERON:0009856,6.05e-08,26;UBERON:0009854,6.22e-08,23;UBERON:0002365,8.52e-08,31;UBERON:0002330,8.52e-08,31;UBERON:0011216,3.34e-07,223;UBERON:0009497,4.51e-07,25;UBERON:0000015,4.51e-07,25;UBERON:0002423,4.51e-07,25;UBERON:0006235,4.51e-07,25;UBERON:0004161,4.51e-07,25;UBERON:0004111,8.91e-07,240 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0.791300934685361,1.11389717664042,1.65698687863958,0.672325146451775,0,0.730310090387373,0.975865597581014,0.369363174230364,0.204000691244253,0.626909442956176,0.85870796139317,0.410623275218653,0.125542639594803,0.458480434487708,0.492603536699674,0.550975469195755,0,0,0,0,0,0,0.852139206383318,0.426507697462265,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0,0,1.23360899399706,0.334372990781356,0,0.473447805734733,0,0.779873198196215,0.883817722424512,0.443067789167242,0,2.68991771423918,1.8208308658383,2.46656856905514,2.21080014228679,0.869409257205157,0.593146252648242,0,0,1.47302145506836,0.383220493601921,0.68725489096526,0,0.637130828648193,0,0,0.602300476311091,0.383959833463255,0,1.65744076430812,0.821127996921047,0,0.267440195783507,0.868946423296794,0,0,0.767175371061182,1.0843174571537,0,0.289693037921647,0.795285947051099,0,0.567208902984407,0.221729397462564,0.175669571386252,0.458426764241994,1.09288586487763,0.370784442784429,0.324547393654683,0.870648686496336,0.26591592103773,0,0,0,1.59009925893364,1.72046919021225,1.38856200643038,0,0,0.275118041940067,0.417989933073621,1.55050055501597,2.49036383880697,0,4.02829317109147,4.56163263431108,0.24406205754817,2.57364156242108,0,0.803697554556718,0.898117490504679,0.675668882899933,0,0,0.549605231791222,0,0,0,0,0.25326102332916,0.132409180813219,0,1.06400514659507,0,0,0.49333509683432,0,0.942974704487816,1.63461903113459,0.908144565869588,0,0,0,0.570471821544449,0.597794722207204,0.352303495931295,0.161872944368132,0.280901613404497,0.408308342509787,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0.673344455816265,0.125118519871964,0,0.438977620880838,0,0,0.907457465280168,0.717558542755448,0,0,0,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.201504196455281,0.339121184620975,0.773043412653187,0,0,0,0.530119073285941,0.348581828608555,0.10366105501537,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0.473227200159376,0.337169380156203,0.964044119533928,1.43382164552112,0.871517776369625,0.71181185733329,1.07865046528132,1.56977172100277,1.53898862778556,4.42893272774789,1.40241773803446,0.4115740113314,0,1.26755034821831,6.87979051674338,3.54473944008842,0.441463099414651,1.47586126251736,0,0.219500570817251,0,0.502644862058154,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.463721619900307,0.117408694235822,1.44366447761074,3.70388410061289,1.14152491340759,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.880484340132261,0,0.144119953416961,0.6312121671319,0.444485260045183,0,0,0,0.514137463516618,0.600686115687835,0,0,0.43596006883328,0.5867062865676,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,1.41849132023278,0.799266537048298,0.285955987316295,2.17048642156577,0,0.65147236858747,0.355391948742546,0.791951872933429,0.904318131178758,0,0.399891964728228,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,1.2328579353023,0.179060963239896,2.4658731678576,0.985153801009636,0,0.77005821767849,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.981531933753119,1.50051156317903,2.98391526069709,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.195801157462741,1.02943027143257,0.206768026122887,0,0.426910231213777,0.606255142892519,0,0,0,0.460385919864187,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0,0.464841513839837,0.725156697549733,0,0.0920809889358963,0.229628896329213,0.364182336013434,0.131124414959424,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,1.36074964221213,0.215915916102139,0,0.541892875087706,0,0,0.831076008928724,0.223874754722178,0.438519753291869,0.784306353074702,0,0,0.650756789328606,1.23649213977267,0.183138929636687,0.247528499761764,0.574265537996172,0.650060246036521,0,0.676695028044854,1.3864375540318,0.614014698904518,0.551346289938122,0.322260734604821,0.580066775656914,0.170453254832202,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,1.56989728039846,0.179872457583315,0.274537029736055,0.117812402345686,0.808729926293264,0,0.842516912477962,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,1.40847801266121,0.143411352204052,0.19649808202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| ||
|short_description=p3@AGFG2 | |short_description=p3@AGFG2 | ||
}} | }} |
Latest revision as of 07:31, 20 September 2015
Short description: | p3@AGFG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGFG2_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 47bp_to_BC047227_5end |
EntrezGene: | AGFG2 |
HGNC: | 5177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.80e-12 | 12 |
endothelial cell | 3.24e-07 | 36 |
lymphangioblast | 3.66e-07 | 6 |
endothelial cell of lymphatic vessel | 3.66e-07 | 6 |
vascular lymphangioblast | 3.66e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 1.81e-08 | 19 |
digestive gland | 1.81e-08 | 19 |
liver bud | 1.81e-08 | 19 |
hepatic diverticulum | 2.01e-08 | 22 |
liver primordium | 2.01e-08 | 22 |
epithelial sac | 2.17e-08 | 25 |
foregut | 4.71e-08 | 87 |
sac | 6.05e-08 | 26 |
digestive tract diverticulum | 6.22e-08 | 23 |
exocrine gland | 8.52e-08 | 31 |
exocrine system | 8.52e-08 | 31 |
organ system subdivision | 3.34e-07 | 223 |
epithelium of foregut-midgut junction | 4.51e-07 | 25 |
anatomical boundary | 4.51e-07 | 25 |
hepatobiliary system | 4.51e-07 | 25 |
foregut-midgut junction | 4.51e-07 | 25 |
septum transversum | 4.51e-07 | 25 |
anatomical conduit | 8.91e-07 | 240 |