FFCP PHASE1:Hg19::chr7:128410336..128410348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:128410336..128410348,+ | |||
|coexpression_cluster_id=C720 | |||
|description=CAGE_peak_at_chr7:128410336..128410348,+ | |description=CAGE_peak_at_chr7:128410336..128410348,+ | ||
|id=chr7:128410336..128410348,+ | |id=chr7:128410336..128410348,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.48e-16!180;CL:0000057!4.71e-11!75;CL:0002334!1.39e-07!12 | |ontology_enrichment_celltype=CL:0000055!9.48e-16!180;CL:0000057!4.71e-11!75;CL:0002334!1.39e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.93e-13;55!CL:0000048;8.53e-12;58!CL:0000723;9.95e-11;61!CL:0000034;2.07e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.73e-11,427;CL:0000723,8.74e-11,433;CL:0000034,2.62e-10,441;CL:0002320,5.31e-09,361;CL:0000134,7.89e-09,354;CL:0000057,9.29e-08,76;CL:0000219,1.88e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.44e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.31e-20;14!DOID:120;1.81e-09;27!DOID:193;1.19e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.29e-21,14;DOID:120,1.17e-09,27;DOID:193,8.01e-09,29 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;4.82e-09;13!UBERON:0002118;5.09e-09;5!UBERON:0004457;1.44e-07;9!UBERON:0000042;1.44e-07;9!UBERON:0003688;1.47e-07;6!UBERON:0002358;1.47e-07;6!UBERON:0003684;1.47e-07;6!UBERON:0001178;1.47e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.40e-09,371;UBERON:0000992,2.34e-09,13;UBERON:0002118,3.60e-09,5;UBERON:0003688,1.83e-07,6;UBERON:0002358,1.83e-07,6;UBERON:0003684,1.83e-07,6;UBERON:0001178,1.83e-07,6;UBERON:0005406,8.56e-07,2 | |||
|phase1_expression=0.726713517082227,1.49870366723688,0.704772020479856,7.00513088471913,4.46961094427288,6.10636966870258,2.53299878168311,0.631719873426831,0,0,0,0.218441372130172,0,0,1.65698687863958,1.34465029290355,1.20538905604795,0,0.975865597581014,0.369363174230364,0,0,0,0,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,7.95166135246046,0,1.01392563272577,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,1.49091585508596,0.12663051166458,0.132409180813219,9.75244510545967,0.709336764396714,0,0,0.24666754841716,0,0.942974704487816,0.817309515567294,0.302714855289863,0,0,0,0,0,0.704606991862589,0.485618833104395,0.140450806702248,0.408308342509787,0.368502951935304,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,0.277064115484183,0.438977620880838,1.22595118319608,0,0.113432183160021,7.35497506324334,0,0.635795703478686,13.5040993237981,1.03052529238439,3.34932702059318,0.37223371266318,0.675105328965065,1.94874010322397,5.04867548488229,0.368199594569197,0.80823028409406,12.0703261455649,2.11579406278045,0,0.193260853163297,0.545492241181669,0,0,0,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0.643240938192885,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0.246217006087397,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0.571652865261156,0.112131084345361,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,2.10833939483032,0.958499421966331,2.29723871668228,0,0.723906533337896,0.61642896765115,0.537182889719687,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.415941723061614,2.3195768543631,1.41932173530541,1.05427273493442,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0.992431231275107,1.07423381301644,0.561320188866147,0.896974044789907,2.55853624533352,1.12597744800525,2.96836132889982,0.616838775210622,0.355123450626254,0.164254312027618,0.519254429183621,1.62694529843943,0,0.200506470303285,0.276242966807689,0.114814448164607,0.546273504020151,0,0,0.231046011313244,0,0,0,0,0.680374821106063,0.647747748306418,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.27470839445503,0,0,0,0,0.096670718292122,1.23238893691716,0.460511024178389,1.24052915236078,0.107420244868274,0.870100163485371,0.170453254832202,0.267096106940212,0,0,0.127612712494584,0,0.464845549297286,9.12955805808856,0,0,0,0,0,0.429374660225974,0,0.949138274156178,1.14378116354295,0.255897791311334,0.855877976067841,0.318203247925937,1.56989728039846,0,0.823611089208164,0.235624804691373,0.404364963146632,0,0,0,0,0,2.18399858252777,1.1312434556297,0,0,0.66343897524122,1.75380354101505,0,1.31178950409327,0.202910376962704,0.6196469961995,0.563391205064483,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.633322905892992,6.25660296623814,0,0,0,0,0,0.188287601553558,0,0,0,0.459446800413919,0.507447609232169,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0.213425530045242,0,0,0,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0,0,0.284136146806413,0,0,1.22864280839693,0,0,0,0.494411622680279,0,0,0,0,0,0,1.86623752597084,0.179736702294654,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.472775363535873,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0,0.341826167541004,0.23056390438806,0,0.108647371922008,0.957003479195758,0.641183153813036,3.19820865611181,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.17472666824203,0,0.387025325156341,0.0730893170861856,0.0821154570532092,0,0.176512253383001,0.225980740780532,0.137041924646751,0.397429223405979,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,0,0,0,0.432164393964449,0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|short_description=p@chr7:128410336..128410348,+ | |short_description=p@chr7:128410336..128410348,+ | ||
}} | }} |
Latest revision as of 05:48, 31 July 2015
Short description: | p@chr7:128410336..128410348, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:128410336..128410348, + |
Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.73e-11 | 427 |
somatic stem cell | 8.74e-11 | 433 |
stem cell | 2.62e-10 | 441 |
connective tissue cell | 5.31e-09 | 361 |
mesenchymal cell | 7.89e-09 | 354 |
fibroblast | 9.29e-08 | 76 |
motile cell | 1.88e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.40e-09 | 371 |
female gonad | 2.34e-09 | 13 |
right ovary | 3.60e-09 | 5 |
omentum | 1.83e-07 | 6 |
peritoneum | 1.83e-07 | 6 |
abdominal cavity | 1.83e-07 | 6 |
visceral peritoneum | 1.83e-07 | 6 |
perirenal fat | 8.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.29e-21 | 14 |
female reproductive organ cancer | 1.17e-09 | 27 |
reproductive organ cancer | 8.01e-09 | 29 |