FFCP PHASE1:Hg19::chr22:29025920..29025935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:29025920..29025935,- | |||
|coexpression_cluster_id=C535 | |||
|description=CAGE_peak_at_chr22:29025920..29025935,- | |description=CAGE_peak_at_chr22:29025920..29025935,- | ||
|id=chr22:29025920..29025935,- | |id=chr22:29025920..29025935,- | ||
|ontology_enrichment_celltype=CL:0000167!2.99e-07!1;CL:0000164!2.99e-07!1;CL:0000502!2.99e-07!1;CL:0000172!2.99e-07!1;CL:0000173!2.99e-07!1;CL:0002351!2.99e-07!1 | |ontology_enrichment_celltype=CL:0000167!2.99e-07!1;CL:0000164!2.99e-07!1;CL:0000502!2.99e-07!1;CL:0000172!2.99e-07!1;CL:0000173!2.99e-07!1;CL:0002351!2.99e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease=DOID:162!7.26e-12!235;DOID:14566!1.67e-11!239;DOID:0050687!4.31e-10!143;DOID:4430!2.99e-07!1;DOID:0050686!3.82e-07!137;DOID:0050619!4.78e-07!1;DOID:1357!4.78e-07!1;DOID:3371!7.57e-07!1;DOID:4549!7.57e-07!1;DOID:5861!7.57e-07!1;DOID:6496!7.57e-07!1 | |ontology_enrichment_disease=DOID:162!7.26e-12!235;DOID:14566!1.67e-11!239;DOID:0050687!4.31e-10!143;DOID:4430!2.99e-07!1;DOID:0050686!3.82e-07!137;DOID:0050619!4.78e-07!1;DOID:1357!4.78e-07!1;DOID:3371!7.57e-07!1;DOID:4549!7.57e-07!1;DOID:5861!7.57e-07!1;DOID:6496!7.57e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.66e-11;4!DOID:4362;3.35e-09;5!DOID:1325;5.23e-07;7!DOID:3904;5.23e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.80e-11,4;DOID:4362,3.49e-09,5;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001764!4.78e-07!1;UBERON:0001825!4.78e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.35e-09;5!UBERON:0005388;3.35e-09;5!UBERON:0001802;3.35e-09;5!UBERON:0000002;7.01e-08;6!UBERON:0001560;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6 | |||
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|short_description=p@chr22:29025920..29025935,- | |short_description=p@chr22:29025920..29025935,- | ||
}} | }} |
Latest revision as of 19:53, 28 July 2015
Short description: | p@chr22:29025920..29025935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:29025920..29025935, - |
Coexpression cluster: | C535_medulloblastoma_small_pineal_retinoblastoma_eye_Retinal_retina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.80e-11 | 4 |
cervical cancer | 3.49e-09 | 5 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |