FFCP PHASE1:Hg19::chr22:37505474..37505478,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164656 | |EntrezGene=164656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16517 | |HGNC=16517 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000406725_5end | |association_with_transcript=-25bp_to_ENST00000406725_5end | ||
|cluster_id=chr22:37505474..37505478,- | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_3_at_TMPRSS6_5end | |description=CAGE_peak_3_at_TMPRSS6_5end | ||
|id=chr22:37505474..37505478,- | |id=chr22:37505474..37505478,- | ||
|ontology_enrichment_celltype=CL:0000181!2.70e-44!12;CL:0000417!2.70e-44!12;CL:0000668!2.70e-44!12;CL:0000414!2.70e-44!12;CL:0000412!2.70e-44!12;CL:0000182!2.70e-44!12;CL:0000223!2.36e-17!59;CL:0002563!6.37e-12!4;CL:0002535!6.07e-07!2 | |ontology_enrichment_celltype=CL:0000181!2.70e-44!12;CL:0000417!2.70e-44!12;CL:0000668!2.70e-44!12;CL:0000414!2.70e-44!12;CL:0000412!2.70e-44!12;CL:0000182!2.70e-44!12;CL:0000223!2.36e-17!59;CL:0002563!6.37e-12!4;CL:0002535!6.07e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.72e-56;12!CL:0002535;1.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.79e-56,12;CL:0000223,9.58e-19,58;CL:0002535,1.73e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.34e-46;11!UBERON:0009497;9.33e-39;13!UBERON:0001041;1.01e-16;30!UBERON:0003104;3.10e-16;31!CL:0000223;2.28e-13;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@TMPRSS6 | |short_description=p3@TMPRSS6 | ||
}} | }} |
Latest revision as of 04:04, 20 September 2015
Short description: | p3@TMPRSS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMPRSS6_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -25bp_to_ENST00000406725_5end |
EntrezGene: | TMPRSS6 |
HGNC: | 16517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.79e-56 | 12 |
endodermal cell | 9.58e-19 | 58 |
epithelial cell of cervix | 1.73e-08 | 2 |