FFCP PHASE1:Hg19::chr7:2701975..2702006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80727 | |EntrezGene=80727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=22222 | |HGNC=22222 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-465bp_to_BC069027_5end | |association_with_transcript=-465bp_to_BC069027_5end | ||
|cluster_id=chr7:2701975..2702006,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_18_at_TTYH3_5end | |description=CAGE_peak_18_at_TTYH3_5end | ||
|id=chr7:2701975..2702006,+ | |id=chr7:2701975..2702006,+ | ||
|ontology_enrichment_celltype=CL:0002321!2.77e-09!248;CL:0000220!8.29e-09!246;CL:0000839!4.44e-08!70;CL:0000557!9.37e-08!71;CL:0002194!1.62e-07!63;CL:0000576!1.62e-07!63;CL:0000040!1.62e-07!63;CL:0000559!1.62e-07!63;CL:0002371!3.43e-07!591;CL:0000144!5.40e-07!625;CL:0000055!6.31e-07!180;CL:0000222!6.57e-07!119;CL:0002009!7.07e-07!65;CL:0000071!8.14e-07!18;CL:0002546!8.14e-07!18 | |ontology_enrichment_celltype=CL:0002321!2.77e-09!248;CL:0000220!8.29e-09!246;CL:0000839!4.44e-08!70;CL:0000557!9.37e-08!71;CL:0002194!1.62e-07!63;CL:0000576!1.62e-07!63;CL:0000040!1.62e-07!63;CL:0000559!1.62e-07!63;CL:0002371!3.43e-07!591;CL:0000144!5.40e-07!625;CL:0000055!6.31e-07!180;CL:0000222!6.57e-07!119;CL:0002009!7.07e-07!65;CL:0000071!8.14e-07!18;CL:0002546!8.14e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.88e-13;10!CL:0002567;2.37e-12;3!CL:0000147;5.99e-09;14!CL:0000071;2.76e-08;18!CL:0002595;3.67e-07;5!CL:0000359;6.16e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.76e-13,10;CL:0000541,4.76e-13,10;CL:0002567,2.54e-12,3;CL:0000147,4.23e-09,14;CL:0000071,1.52e-08,18;CL:0002546,1.52e-08,18;CL:0002321,7.41e-08,250;CL:0000115,9.07e-08,36;CL:0000222,1.50e-07,121;CL:0000359,2.42e-07,32;CL:0002595,2.51e-07,5;CL:0000393,8.48e-07,61;CL:0000211,8.48e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;2.76e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.35e-08!42;UBERON:0003509!1.35e-08!42;UBERON:0004572!1.35e-08!42;UBERON:0002204!4.46e-08!167;UBERON:0001981!1.17e-07!60;UBERON:0007500!1.17e-07!60;UBERON:0004537!1.17e-07!60;UBERON:0006965!1.17e-07!60;UBERON:0000922!1.43e-07!612;UBERON:0000467!3.04e-07!625;UBERON:0000480!4.06e-07!626;UBERON:0003081!5.50e-07!216;UBERON:0002050!6.59e-07!605;UBERON:0005423!6.59e-07!605;UBERON:0001986!8.14e-07!18;UBERON:0004638!8.14e-07!18;UBERON:0004852!8.14e-07!18;UBERON:0000468!9.17e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;6.56e-09;56!UBERON:0001981;6.56e-09;56!UBERON:0004537;6.56e-09;56!UBERON:0003513;2.07e-08;7!UBERON:0004638;2.76e-08;18!UBERON:0001986;2.76e-08;18!UBERON:0004852;2.76e-08;18!UBERON:0003834;3.67e-07;5!UBERON:0001533;3.67e-07;5!UBERON:0001637;4.84e-07;42!UBERON:0003509;4.84e-07;42!UBERON:0004572;4.84e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,5.56e-13,59;UBERON:0001981,5.56e-13,59;UBERON:0004537,5.56e-13,59;UBERON:0006965,5.56e-13,59;UBERON:0000055,9.95e-11,68;UBERON:0001637,1.81e-09,42;UBERON:0003509,1.81e-09,42;UBERON:0004572,1.81e-09,42;UBERON:0004872,3.47e-09,83;UBERON:0002049,7.51e-09,78;UBERON:0007798,7.51e-09,78;UBERON:0003513,1.31e-08,7;UBERON:0004638,1.52e-08,18;UBERON:0001986,1.52e-08,18;UBERON:0004852,1.52e-08,18;UBERON:0000490,2.34e-08,148;UBERON:0003914,6.19e-08,117;UBERON:0003834,2.51e-07,5;UBERON:0001533,2.51e-07,5;UBERON:0004573,2.78e-07,33;UBERON:0004571,2.78e-07,33;UBERON:0004535,5.96e-07,109;UBERON:0000487,8.28e-07,22 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0.245733936501509,2.09340350391728,0,0,0.247532705920093,0.662794751455832,1.34465029290355,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0.684372125364421,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,1.10926203050036,0,0,0,0,0.200544447470142,0.868043482863407,0.671746422719773,0.971680998056939,1.54545340580512,0.726991193897824,0.377875943688809,0.727752183563449,0.232429036905685,0,0.309706370895104,0.28769239232215,0.768482119587302,0.236482229888585,0.344745680736619,0,0,0.752969358170419,0.818718450173537,0.674170453335254,0.612167784741805,2.24650318953266,0.639337125799041,0.329851300186716,0.199463657621632,0,0,1.13477044938228,0,0,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0,0.422510572623884,0.425208599930087,0.209658645508376,0.112328631146495,0,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0.43917392846563,0.261958150995425,0.728590576585084,0,0.649094787309367,0.348259474598534,0.664789802594326,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,1.69592382577203,0.419499436209906,1.10047216776027,0.835979866147242,0,0,0.33472061276467,1.20848795132744,0,1.22031028774085,0.735326160691737,1.62028389576352,0.17859945656816,0,0,1.53316637465883,1.89853131913626,0.732806975721629,0,0,0,0.496971951695318,0.759783069987479,0,0.573673241497627,0,0,1.06748995729705,0.98667019366864,0,0.67355336034844,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0,0.213557388818567,0.423863802319124,0,0.618315175430633,0,0.37223371266318,0,0.0974370051611986,0.252433774244115,0,0.323292113637624,0,0.10075209822764,0.169560592310488,0.386521706326594,0,0.286804595389004,0.731842236777572,0.397589304964456,0.116193942869518,0.725627385107593,0,0,0,0,2.76269842704961,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,1.4763109092493,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0.171567810298526,0.658501712451753,0,0,0,0.325808305310325,0,0,0.115930404975077,0.352226082707465,0,0,0.570762456703795,0,0,0.984868024349589,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.264145302039678,0.621984346622316,0.288239906833923,0.37872730027914,1.52394946301206,3.05590740446622,33.9930596909136,8.55362230113526,1.64523988325318,0.901029173531752,4.28739648945867,0.336393253036082,0.43596006883328,0.07333828582095,0,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,1.50677127429638,6.32501818449095,0,0,1.42636905040718,0,0,0,0,0,0,0,2.54094624222463,0,0,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0.831883446123229,0.356857977594324,0.157702415033935,0.117141414992713,1.50473049863859,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0.343143423810856,0,0,0.213455115606889,0,0,0.30239029332968,0.496215615637554,0,1.12264037773229,0.256278298511402,0,0,1.48418066444991,0.462629081407967,0.355123450626254,0,1.03850885836724,0.232420756919918,0.846016147141356,1.40354529212299,0.276242966807689,0.114814448164607,0.546273504020151,1.04899531967539,0.451199612907412,0,0,1.46139224653261,0.316654886678627,0,0.340187410553031,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.984043937099117,0.976135183992909,0.515205058238611,0,0,0.574265537996172,0,0,1.16004861950546,0,0,0,0.214840489736547,0.580066775656914,0.0852266274161009,0.178064071293475,0.661139661443912,0.384380134730212,0,0,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0,1.48259375283136,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0.318203247925937,3.13979456079692,0,0.274537029736055,0.353437207037059,0.606547444719948,0,1.68503382495592,0,0.243713489631284,3.16950440270266,0.272999822815972,0.707027159768564,1.13008116620243,1.65409603063837,0,3.06915619677634,0.578775534266688,0.655894752046633,1.01455188481352,0.30982349809975,0.281695602532241,0.286822704408103,0,0.7133421029625,0,0.211107635297664,0,0,0,0,0,1.08890984861323,0.0941438007767792,2.15252686335615,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0.28853842595289,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0.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| ||
|short_description=p18@TTYH3 | |short_description=p18@TTYH3 | ||
}} | }} |
Latest revision as of 00:44, 18 September 2015
Short description: | p18@TTYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TTYH3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -465bp_to_BC069027_5end |
EntrezGene: | TTYH3 |
HGNC: | 22222 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.76e-13 | 10 |
melanoblast | 4.76e-13 | 10 |
light melanocyte | 2.54e-12 | 3 |
pigment cell | 4.23e-09 | 14 |
blood vessel endothelial cell | 1.52e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.52e-08 | 18 |
embryonic cell | 7.41e-08 | 250 |
endothelial cell | 9.07e-08 | 36 |
mesodermal cell | 1.50e-07 | 121 |
vascular associated smooth muscle cell | 2.42e-07 | 32 |
smooth muscle cell of the subclavian artery | 2.51e-07 | 5 |
electrically responsive cell | 8.48e-07 | 61 |
electrically active cell | 8.48e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 5.56e-13 | 59 |
blood vessel | 5.56e-13 | 59 |
blood vasculature | 5.56e-13 | 59 |
vascular cord | 5.56e-13 | 59 |
vessel | 9.95e-11 | 68 |
artery | 1.81e-09 | 42 |
arterial blood vessel | 1.81e-09 | 42 |
arterial system | 1.81e-09 | 42 |
splanchnic layer of lateral plate mesoderm | 3.47e-09 | 83 |
vasculature | 7.51e-09 | 78 |
vascular system | 7.51e-09 | 78 |
trunk blood vessel | 1.31e-08 | 7 |
blood vessel endothelium | 1.52e-08 | 18 |
endothelium | 1.52e-08 | 18 |
cardiovascular system endothelium | 1.52e-08 | 18 |
unilaminar epithelium | 2.34e-08 | 148 |
epithelial tube | 6.19e-08 | 117 |
thoracic segment blood vessel | 2.51e-07 | 5 |
subclavian artery | 2.51e-07 | 5 |
systemic artery | 2.78e-07 | 33 |
systemic arterial system | 2.78e-07 | 33 |
cardiovascular system | 5.96e-07 | 109 |
simple squamous epithelium | 8.28e-07 | 22 |