FFCP PHASE1:Hg19::chr22:39474550..39474559,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60489 | |EntrezGene=60489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17357 | |HGNC=17357 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000486357_5end | |association_with_transcript=33bp_to_ENST00000486357_5end | ||
|cluster_id=chr22:39474550..39474559,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_3_at_APOBEC3G_5end | |description=CAGE_peak_3_at_APOBEC3G_5end | ||
|id=chr22:39474550..39474559,+ | |id=chr22:39474550..39474559,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.40e-37!18;CL:0000789!7.40e-37!18;CL:0002420!7.40e-37!18;CL:0002419!7.40e-37!18;CL:0000790!7.40e-37!18;CL:0000625!6.01e-33!11;CL:0000084!5.85e-26!25;CL:0000827!5.85e-26!25;CL:0000623!3.33e-19!3;CL:0000825!3.33e-19!3;CL:0000838!3.39e-19!52;CL:0000738!8.54e-19!140;CL:0000542!8.87e-19!53;CL:0000051!8.87e-19!53;CL:0000767!3.35e-18!3;CL:0000037!2.20e-14!172;CL:0000566!2.20e-14!172;CL:0002032!1.03e-13!165;CL:0000837!1.03e-13!165;CL:0002087!1.70e-13!119;CL:0000988!2.53e-13!182;CL:0000094!6.94e-12!8;CL:0002031!2.76e-11!124;CL:0000081!1.14e-08!11;CL:0002127!8.18e-07!1;CL:0000914!8.18e-07!1;CL:0000911!8.18e-07!1;CL:0000814!8.18e-07!1;CL:0002042!8.18e-07!1;CL:0002039!8.18e-07!1;CL:0002040!8.18e-07!1;CL:0002041!8.18e-07!1 | |ontology_enrichment_celltype=CL:0000791!7.40e-37!18;CL:0000789!7.40e-37!18;CL:0002420!7.40e-37!18;CL:0002419!7.40e-37!18;CL:0000790!7.40e-37!18;CL:0000625!6.01e-33!11;CL:0000084!5.85e-26!25;CL:0000827!5.85e-26!25;CL:0000623!3.33e-19!3;CL:0000825!3.33e-19!3;CL:0000838!3.39e-19!52;CL:0000738!8.54e-19!140;CL:0000542!8.87e-19!53;CL:0000051!8.87e-19!53;CL:0000767!3.35e-18!3;CL:0000037!2.20e-14!172;CL:0000566!2.20e-14!172;CL:0002032!1.03e-13!165;CL:0000837!1.03e-13!165;CL:0002087!1.70e-13!119;CL:0000988!2.53e-13!182;CL:0000094!6.94e-12!8;CL:0002031!2.76e-11!124;CL:0000081!1.14e-08!11;CL:0002127!8.18e-07!1;CL:0000914!8.18e-07!1;CL:0000911!8.18e-07!1;CL:0000814!8.18e-07!1;CL:0002042!8.18e-07!1;CL:0002039!8.18e-07!1;CL:0002040!8.18e-07!1;CL:0002041!8.18e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.01e-67;3!CL:0000625;3.62e-32;11!CL:0000791;7.01e-20;18!CL:0000789;7.01e-20;18!CL:0002419;7.01e-20;18!CL:0000084;1.89e-14;25!CL:0000542;1.32e-11;53!CL:0000767;1.46e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.01e-67,3;CL:0000825,5.01e-67,3;CL:0000625,3.92e-32,11;CL:0000838,1.14e-20,52;CL:0000542,2.81e-20,53;CL:0000051,2.81e-20,53;CL:0000791,7.36e-20,18;CL:0000789,7.36e-20,18;CL:0002420,7.36e-20,18;CL:0002419,7.36e-20,18;CL:0000790,7.36e-20,18;CL:0000084,1.96e-14,25;CL:0000827,1.96e-14,25;CL:0000738,4.28e-10,136;CL:0002087,3.34e-09,115;CL:0002031,8.17e-09,120;CL:0000767,1.40e-08,3;CL:0002032,1.72e-08,161;CL:0000837,1.72e-08,161;CL:0000037,3.99e-08,168;CL:0000988,1.07e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;7.01e-20;18!CL:0000051;1.32e-11;53 | |||
|ontology_enrichment_disease=DOID:3347!2.84e-07!1 | |ontology_enrichment_disease=DOID:3347!2.84e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@APOBEC3G | |short_description=p3@APOBEC3G | ||
}} | }} |
Latest revision as of 17:54, 24 September 2015
Short description: | p3@APOBEC3G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOBEC3G_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 33bp_to_ENST00000486357_5end |
EntrezGene: | APOBEC3G |
HGNC: | 17357 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.01e-67 | 3 |
pro-NK cell | 5.01e-67 | 3 |
CD8-positive, alpha-beta T cell | 3.92e-32 | 11 |
lymphoid lineage restricted progenitor cell | 1.14e-20 | 52 |
lymphocyte | 2.81e-20 | 53 |
common lymphoid progenitor | 2.81e-20 | 53 |
mature alpha-beta T cell | 7.36e-20 | 18 |
alpha-beta T cell | 7.36e-20 | 18 |
immature T cell | 7.36e-20 | 18 |
mature T cell | 7.36e-20 | 18 |
immature alpha-beta T cell | 7.36e-20 | 18 |
T cell | 1.96e-14 | 25 |
pro-T cell | 1.96e-14 | 25 |
leukocyte | 4.28e-10 | 136 |
nongranular leukocyte | 3.34e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.17e-09 | 120 |
basophil | 1.40e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-08 | 161 |
hematopoietic stem cell | 3.99e-08 | 168 |
hematopoietic cell | 1.07e-07 | 177 |