FFCP PHASE1:Hg19::chr13:92756423..92756437,+: Difference between revisions
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|id=chr13:92756423..92756437,+
|short_description=p@chr13:92756423..92756437,+
|description=CAGE_peak_at_chr13:92756423..92756437,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:92756423..92756437,+ | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr13:92756423..92756437,+ | |||
|id=chr13:92756423..92756437,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.07e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.27e-33;4!CL:0002253;1.17e-17;2!CL:0002231;1.85e-12;3!CL:0002076;3.16e-08;42!CL:0002251;1.45e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.38e-33,4;CL:0002253,1.27e-17,2;CL:0002231,1.85e-12,3;CL:0002076,8.13e-08,42;CL:0002251,1.47e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!3.10e-10!1;DOID:326!3.10e-10!1;DOID:3978!3.10e-10!1;DOID:3394!3.10e-10!1;DOID:5844!3.10e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.22e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001242!6.07e-10!4;UBERON:0001262!6.07e-10!4;UBERON:0004786!6.07e-10!4;UBERON:0004808!6.07e-10!4;UBERON:0001277!6.07e-10!4;UBERON:0001052!6.93e-10!4;UBERON:0003350!4.01e-08!5;UBERON:0004907!4.45e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.27e-33;4!UBERON:0001262;1.27e-33;4!UBERON:0004786;1.27e-33;4!UBERON:0004808;1.27e-33;4!UBERON:0001277;1.27e-33;4!UBERON:0000485;9.95e-20;7!UBERON:0003929;9.95e-20;7!UBERON:0003350;2.10e-17;8!UBERON:0001052;1.63e-09;4!UBERON:0005911;9.59e-09;36!UBERON:0000160;2.65e-08;17!UBERON:0004907;7.25e-08;5!UBERON:0000344;1.45e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.38e-33,4;UBERON:0001262,1.38e-33,4;UBERON:0004786,1.38e-33,4;UBERON:0004808,1.38e-33,4;UBERON:0001277,1.38e-33,4;UBERON:0003350,2.19e-17,8;UBERON:0000485,1.41e-15,9;UBERON:0001052,1.70e-09,4;UBERON:0000160,2.70e-08,17;UBERON:0001046,5.94e-08,19;UBERON:0004907,7.49e-08,5;UBERON:0000344,1.47e-07,20;UBERON:0005911,5.36e-07,82 | |||
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|short_description=p@chr13:92756423..92756437,+ | |||
}} | }} |
Latest revision as of 17:27, 24 July 2015
Short description: | p@chr13:92756423..92756437, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:92756423..92756437, + |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.38e-33 | 4 |
epithelial cell of large intestine | 1.27e-17 | 2 |
epithelial cell of prostate | 1.85e-12 | 3 |
endo-epithelial cell | 8.13e-08 | 42 |
epithelial cell of alimentary canal | 1.47e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.38e-33 | 4 |
wall of intestine | 1.38e-33 | 4 |
gastrointestinal system mucosa | 1.38e-33 | 4 |
gastrointestinal system epithelium | 1.38e-33 | 4 |
intestinal epithelium | 1.38e-33 | 4 |
epithelium of mucosa | 2.19e-17 | 8 |
simple columnar epithelium | 1.41e-15 | 9 |
rectum | 1.70e-09 | 4 |
intestine | 2.70e-08 | 17 |
hindgut | 5.94e-08 | 19 |
lower digestive tract | 7.49e-08 | 5 |
mucosa | 1.47e-07 | 20 |
endo-epithelium | 5.36e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.22e-09 | 4 |