FFCP PHASE1:Hg19::chr13:99135278..99135298,-: Difference between revisions
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|id=chr13:99135278..99135298,-
|short_description=p@chr13:99135278..99135298,-
|description=CAGE_peak_at_chr13:99135278..99135298,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:99135278..99135298,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr13:99135278..99135298,- | |||
|id=chr13:99135278..99135298,- | |||
|ontology_enrichment_celltype=CL:0002586!1.40e-11!3;CL:0000149!9.05e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.30e-60;3!CL:0000149;2.12e-45;4!CL:0000147;1.57e-13;14!CL:0000077;5.27e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.98e-60,3;CL:0000149,1.97e-45,4;CL:0000147,1.54e-13,14;CL:0000077,5.35e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.52e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!6.52e-12!5;UBERON:0005388!6.52e-12!5;UBERON:0001802!6.52e-12!5;UBERON:0001781!1.40e-11!3;UBERON:0001782!1.40e-11!3;UBERON:0005424!1.40e-11!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.68e-64;5!UBERON:0005388;4.68e-64;5!UBERON:0001802;4.68e-64;5!UBERON:0001781;3.30e-60;3!UBERON:0001782;3.30e-60;3!UBERON:0000970;3.92e-25;20!UBERON:0002104;5.98e-24;21!UBERON:0000020;6.86e-22;23!UBERON:0001032;5.47e-21;24!UBERON:0004456;5.47e-21;24!UBERON:0000019;2.87e-17;19!UBERON:0000047;2.87e-17;19!UBERON:0004088;2.87e-17;19!UBERON:0010230;2.87e-17;19!UBERON:0007625;4.98e-17;11!UBERON:0001456;1.15e-15;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.98e-60,3;UBERON:0005424,2.98e-60,3;UBERON:0000966,1.58e-53,6;UBERON:0005388,1.58e-53,6;UBERON:0001802,1.58e-53,6;UBERON:0001781,1.97e-45,4;UBERON:0000970,5.84e-24,21;UBERON:0002104,5.84e-24,21;UBERON:0000020,5.35e-21,24;UBERON:0001032,5.35e-21,24;UBERON:0004456,5.35e-21,24;UBERON:0007625,4.85e-17,11;UBERON:0000019,1.95e-16,20;UBERON:0000047,1.95e-16,20;UBERON:0010312,1.95e-16,20;UBERON:0004088,1.95e-16,20;UBERON:0010230,1.95e-16,20;UBERON:0003072,1.95e-16,20;UBERON:0004128,1.95e-16,20;UBERON:0003071,1.95e-16,20;UBERON:0001456,5.57e-15,22;UBERON:0005085,9.64e-11,31;UBERON:0001444,6.62e-07,49 | |||
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| ||
|short_description=p@chr13:99135278..99135298,- | |||
}} | }} |
Latest revision as of 17:40, 24 July 2015
Short description: | p@chr13:99135278..99135298, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:99135278..99135298, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.98e-60 | 3 |
visual pigment cell | 1.97e-45 | 4 |
pigment cell | 1.54e-13 | 14 |
mesothelial cell | 5.35e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.98e-60 | 3 |
presumptive retinal pigmented epithelium | 2.98e-60 | 3 |
retina | 1.58e-53 | 6 |
photoreceptor array | 1.58e-53 | 6 |
posterior segment of eyeball | 1.58e-53 | 6 |
layer of retina | 1.97e-45 | 4 |
eye | 5.84e-24 | 21 |
visual system | 5.84e-24 | 21 |
sense organ | 5.35e-21 | 24 |
sensory system | 5.35e-21 | 24 |
entire sense organ system | 5.35e-21 | 24 |
pigment epithelium of eye | 4.85e-17 | 11 |
camera-type eye | 1.95e-16 | 20 |
simple eye | 1.95e-16 | 20 |
immature eye | 1.95e-16 | 20 |
ocular region | 1.95e-16 | 20 |
eyeball of camera-type eye | 1.95e-16 | 20 |
optic cup | 1.95e-16 | 20 |
optic vesicle | 1.95e-16 | 20 |
eye primordium | 1.95e-16 | 20 |
face | 5.57e-15 | 22 |
ectodermal placode | 9.64e-11 | 31 |
subdivision of head | 6.62e-07 | 49 |