FFCP PHASE1:Hg19::chr7:73183842..73183858,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:73183842..73183858,- | |||
|coexpression_cluster_id=C4696 | |||
|description=CAGE_peak_at_chr7:73183842..73183858,- | |description=CAGE_peak_at_chr7:73183842..73183858,- | ||
|id=chr7:73183842..73183858,- | |id=chr7:73183842..73183858,- | ||
|ontology_enrichment_celltype=CL:0002322!1.43e-07!5 | |ontology_enrichment_celltype=CL:0002322!1.43e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.93e-09;2 | |||
|ontology_enrichment_disease=DOID:305!2.73e-13!106;DOID:0050687!3.01e-11!143;DOID:299!7.09e-11!25;DOID:5093!8.28e-08!4;DOID:1612!8.28e-08!4;DOID:1325!4.78e-07!7;DOID:3904!4.78e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.72e-16;4!DOID:1612;1.72e-16;4!DOID:299;3.51e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.70e-16,4;DOID:1612,1.70e-16,4;DOID:299,3.70e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!4.55e-12!129;UBERON:0004185!4.55e-12!129;UBERON:0001007!8.62e-11!155;UBERON:0001555!8.62e-11!155;UBERON:0007026!8.62e-11!155;UBERON:0004119!1.73e-10!169;UBERON:0000925!1.73e-10!169;UBERON:0006595!1.73e-10!169;UBERON:0000466!1.86e-10!126;UBERON:0000058!4.46e-10!26;UBERON:0009569!1.61e-09!113;UBERON:0000077!2.37e-09!130;UBERON:0007023!1.26e-08!115;UBERON:0002113!2.60e-08!27;UBERON:0003918!2.60e-08!27;UBERON:0005095!2.60e-08!27;UBERON:0007687!2.60e-08!27;UBERON:0000464!3.22e-08!104;UBERON:0005177!5.15e-08!107;UBERON:0005911!7.24e-08!82;UBERON:0001041!7.30e-08!98;UBERON:0005172!1.39e-07!55;UBERON:0005173!1.39e-07!55;UBERON:0004876!1.82e-07!20;UBERON:0000080!4.23e-07!18;UBERON:0002120!4.23e-07!18;UBERON:0004875!4.23e-07!18;UBERON:0005721!4.23e-07!18;UBERON:0005754!4.23e-07!18;UBERON:0007297!4.23e-07!18;UBERON:0006554!8.70e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.82e-13;4!UBERON:0000160;7.49e-13;17!UBERON:0006947;1.99e-12;3!UBERON:0004054;1.99e-12;3!UBERON:0000310;7.81e-10;10!UBERON:0005409;9.22e-10;22!UBERON:0000058;1.93e-09;10!UBERON:0005904;1.98e-09;4!UBERON:0001829;3.10e-09;2!UBERON:0004921;5.72e-09;33!UBERON:0001443;6.58e-09;11!UBERON:0000341;9.93e-09;2!UBERON:0004175;2.71e-08;21!UBERON:0001155;3.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,6.28e-13,4;UBERON:0000160,9.12e-13,17;UBERON:0006947,1.55e-12,3;UBERON:0004054,1.55e-12,3;UBERON:0002113,4.84e-10,26;UBERON:0003918,4.84e-10,26;UBERON:0011143,4.84e-10,26;UBERON:0005095,4.84e-10,26;UBERON:0007687,4.84e-10,26;UBERON:0000310,7.46e-10,10;UBERON:0005904,1.65e-09,4;UBERON:0001829,3.17e-09,2;UBERON:0001443,6.32e-09,11;UBERON:0000341,9.57e-09,2;UBERON:0009569,1.06e-08,112;UBERON:0005409,2.01e-08,25;UBERON:0000489,3.60e-08,31;UBERON:0005172,2.06e-07,54;UBERON:0005173,2.06e-07,54;UBERON:0001155,3.76e-07,9;UBERON:0004175,8.06e-07,25 | |||
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|short_description=p@chr7:73183842..73183858,- | |short_description=p@chr7:73183842..73183858,- | ||
}} | }} |
Latest revision as of 11:29, 31 July 2015
Short description: | p@chr7:73183842..73183858, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73183842..73183858, - |
Coexpression cluster: | C4696_serous_colon_small_MCF7_thyroid_endometrial_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 6.28e-13 | 4 |
intestine | 9.12e-13 | 17 |
male genital duct | 1.55e-12 | 3 |
internal male genitalia | 1.55e-12 | 3 |
kidney | 4.84e-10 | 26 |
kidney mesenchyme | 4.84e-10 | 26 |
upper urinary tract | 4.84e-10 | 26 |
kidney rudiment | 4.84e-10 | 26 |
kidney field | 4.84e-10 | 26 |
breast | 7.46e-10 | 10 |
duct of male reproductive system | 1.65e-09 | 4 |
major salivary gland | 3.17e-09 | 2 |
chest | 6.32e-09 | 11 |
throat | 9.57e-09 | 2 |
subdivision of trunk | 1.06e-08 | 112 |
gastrointestinal system | 2.01e-08 | 25 |
cavitated compound organ | 3.60e-08 | 31 |
abdomen element | 2.06e-07 | 54 |
abdominal segment element | 2.06e-07 | 54 |
colon | 3.76e-07 | 9 |
internal genitalia | 8.06e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.70e-16 | 4 |
breast cancer | 1.70e-16 | 4 |
adenocarcinoma | 3.70e-09 | 25 |