FFCP PHASE1:Hg19::chr7:80141328..80141339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=346562 | |EntrezGene=346562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22800 | |HGNC=22800 | ||
|TSSclassifier=strong | |||
|UniProt=A8MTJ3 | |UniProt=A8MTJ3 | ||
|association_with_transcript=0bp_to_ENST00000398291_5end | |association_with_transcript=0bp_to_ENST00000398291_5end | ||
|cluster_id=chr7:80141328..80141339,- | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_2_at_GNAT3_5end | |description=CAGE_peak_2_at_GNAT3_5end | ||
|id=chr7:80141328..80141339,- | |id=chr7:80141328..80141339,- | ||
|ontology_enrichment_celltype=CL:0002535!1.57e-10!2;CL:0002253!1.72e-10!2;CL:0002195!3.27e-10!2;CL:0002571!3.27e-10!2 | |ontology_enrichment_celltype=CL:0002535!1.57e-10!2;CL:0002253!1.72e-10!2;CL:0002195!3.27e-10!2;CL:0002571!3.27e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;6.48e-18;2!CL:0002253;7.67e-18;2!CL:0002563;1.32e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.48e-18,2;CL:0002253,7.67e-18,2;CL:0002563,1.32e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!8.95e-20!1;DOID:1357!8.95e-20!1;DOID:5409!5.15e-19!4;DOID:1325!2.69e-11!7;DOID:3904!2.69e-11!7;DOID:0050615!7.09e-11!16;DOID:3905!5.42e-09!9 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.84e-34;1!DOID:1357;1.84e-34;1!DOID:5409;1.57e-09;4!DOID:0050615;2.77e-09;16!DOID:4362;5.73e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.84e-34,1;DOID:1357,1.84e-34,1;DOID:5409,1.44e-09,4;DOID:0050615,2.66e-09,16;DOID:4362,5.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001764!8.95e-20!1;UBERON:0001825!8.95e-20!1;UBERON:0000160!1.11e-10!27;UBERON:0006955!1.57e-10!2;UBERON:0004801!1.57e-10!2;UBERON:0002148!3.58e-10!2;UBERON:0009662!3.58e-10!2;UBERON:0001155!4.80e-09!9;UBERON:0005409!2.26e-08!35;UBERON:0000059!1.46e-07!11;UBERON:0000988!3.35e-07!3;UBERON:0006331!3.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.84e-34;1!UBERON:0001825;1.84e-34;1!UBERON:0006955;6.48e-18;2!UBERON:0004801;6.48e-18;2!UBERON:0000160;3.49e-17;17!UBERON:0001155;1.22e-15;9!UBERON:0005409;1.25e-13;22!UBERON:0000059;5.42e-13;11!UBERON:0001052;1.32e-09;4!UBERON:0001242;1.32e-09;4!UBERON:0001262;1.32e-09;4!UBERON:0004786;1.32e-09;4!UBERON:0004808;1.32e-09;4!UBERON:0001277;1.32e-09;4!UBERON:0004921;4.81e-09;33!UBERON:0004907;6.13e-08;5!UBERON:0002108;7.01e-08;4!UBERON:0000002;7.58e-07;6!UBERON:0001560;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.84e-34,1;UBERON:0001825,1.84e-34,1;UBERON:0006955,6.48e-18,2;UBERON:0004801,6.48e-18,2;UBERON:0000160,3.69e-17,17;UBERON:0001155,1.31e-15,9;UBERON:0000059,5.76e-13,11;UBERON:0005409,3.93e-12,25;UBERON:0001052,1.32e-09,4;UBERON:0001242,1.32e-09,4;UBERON:0001262,1.32e-09,4;UBERON:0004786,1.32e-09,4;UBERON:0004808,1.32e-09,4;UBERON:0001277,1.32e-09,4;UBERON:0004907,6.13e-08,5;UBERON:0002108,7.01e-08,4;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6 | |||
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|short_description=p2@GNAT3 | |short_description=p2@GNAT3 | ||
}} | }} |
Latest revision as of 16:41, 19 September 2015
Short description: | p2@GNAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNAT3_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | 0bp_to_ENST00000398291_5end |
EntrezGene: | GNAT3 |
HGNC: | 22800 |
UniProt: | A8MTJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.48e-18 | 2 |
epithelial cell of large intestine | 7.67e-18 | 2 |
intestinal epithelial cell | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.84e-34 | 1 |
paranasal sinus | 1.84e-34 | 1 |
uterine epithelium | 6.48e-18 | 2 |
cervix epithelium | 6.48e-18 | 2 |
intestine | 3.69e-17 | 17 |
colon | 1.31e-15 | 9 |
large intestine | 5.76e-13 | 11 |
gastrointestinal system | 3.93e-12 | 25 |
rectum | 1.32e-09 | 4 |
intestinal mucosa | 1.32e-09 | 4 |
wall of intestine | 1.32e-09 | 4 |
gastrointestinal system mucosa | 1.32e-09 | 4 |
gastrointestinal system epithelium | 1.32e-09 | 4 |
intestinal epithelium | 1.32e-09 | 4 |
lower digestive tract | 6.13e-08 | 5 |
small intestine | 7.01e-08 | 4 |
uterine cervix | 7.58e-07 | 6 |
neck of organ | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.84e-34 | 1 |
maxillary sinus cancer | 1.84e-34 | 1 |
lung small cell carcinoma | 1.44e-09 | 4 |
respiratory system cancer | 2.66e-09 | 16 |
cervical cancer | 5.73e-08 | 5 |