FFCP PHASE1:Hg19::chr14:105767257..105767289,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:105767257..105767289,-
|short_description=p3@BRF1
|description=CAGE_peak_3_at_BRF1_5end
|association_with_transcript=39bp_to_ENST00000332890,ENST000003450...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2972 | |EntrezGene=2972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11551 | |HGNC=11551 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZD9,C9J8N9,Q92994,Q96KX3 | |UniProt=C9IZD9,C9J8N9,Q92994,Q96KX3 | ||
|association_with_transcript=39bp_to_ENST00000332890,ENST00000345053,NM_001242788,NM_001242790,NM_001519,uc001yqp.2,uc001yqr.2,uc010axg.1_5end | |||
|cluster_id=chr14:105767257..105767289,- | |||
|description=CAGE_peak_3_at_BRF1_5end | |||
|id=chr14:105767257..105767289,- | |||
|ontology_enrichment_celltype=CL:0000084!4.03e-08!25;CL:0000827!4.03e-08!25;CL:0000542!1.08e-07!53;CL:0000051!1.08e-07!53;CL:0000838!2.00e-07!52;CL:0000791!6.01e-07!18;CL:0000789!6.01e-07!18;CL:0002420!6.01e-07!18;CL:0002419!6.01e-07!18;CL:0000790!6.01e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.28e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.58e-08,25;CL:0000827,3.58e-08,25;CL:0000542,4.94e-07,53;CL:0000051,4.94e-07,53;CL:0000791,7.06e-07,18;CL:0000789,7.06e-07,18;CL:0002420,7.06e-07,18;CL:0002419,7.06e-07,18;CL:0000790,7.06e-07,18;CL:0000838,9.24e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@BRF1 | |||
}} | }} |
Latest revision as of 18:43, 18 September 2015
Short description: | p3@BRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BRF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000332890, ENST00000345053, NM_001242788, NM_001242790, NM_001519, uc001yqp.2, uc001yqr.2, uc010axg.1_5end |
EntrezGene: | BRF1 |
HGNC: | 11551 |
UniProt: | C9IZD9C9J8N9Q92994Q96KX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.58e-08 | 25 |
pro-T cell | 3.58e-08 | 25 |
lymphocyte | 4.94e-07 | 53 |
common lymphoid progenitor | 4.94e-07 | 53 |
mature alpha-beta T cell | 7.06e-07 | 18 |
alpha-beta T cell | 7.06e-07 | 18 |
immature T cell | 7.06e-07 | 18 |
mature T cell | 7.06e-07 | 18 |
immature alpha-beta T cell | 7.06e-07 | 18 |
lymphoid lineage restricted progenitor cell | 9.24e-07 | 52 |