FFCP PHASE1:Hg19::chr2:158485242..158485255,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130399 | |EntrezGene=130399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18123 | |HGNC=18123 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000335450,ENST00000348328_5end | |association_with_transcript=-3bp_to_ENST00000335450,ENST00000348328_5end | ||
|cluster_id=chr2:158485242..158485255,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_5_at_ACVR1C_5end | |description=CAGE_peak_5_at_ACVR1C_5end | ||
|id=chr2:158485242..158485255,- | |id=chr2:158485242..158485255,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000453;3.46e-26;5!CL:0000136;3.80e-18;13!CL:0000990;7.35e-15;8!CL:0000451;2.84e-12;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.79e-26,5;CL:0000136,8.98e-16,15;CL:0000990,6.53e-15,8;CL:0000451,2.58e-12,10 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.44e-15;1!UBERON:0006222;2.56e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.07e-49!115;UBERON:0001049!7.32e-46!57;UBERON:0005068!7.32e-46!57;UBERON:0006241!7.32e-46!57;UBERON:0007135!7.32e-46!57;UBERON:0002616!3.44e-41!59;UBERON:0003080!3.61e-41!42;UBERON:0002780!4.55e-39!41;UBERON:0001890!4.55e-39!41;UBERON:0006240!4.55e-39!41;UBERON:0002020!1.51e-34!34;UBERON:0003528!1.51e-34!34;UBERON:0001893!2.13e-34!34;UBERON:0000955!3.02e-33!69;UBERON:0006238!3.02e-33!69;UBERON:0003075!1.15e-32!86;UBERON:0007284!1.15e-32!86;UBERON:0002791!1.51e-32!33;UBERON:0002346!9.51e-31!90;UBERON:0001017!3.13e-30!82;UBERON:0001869!3.48e-30!32;UBERON:0005743!2.20e-28!86;UBERON:0003056!5.64e-26!61;UBERON:0000073!8.53e-25!94;UBERON:0001016!8.53e-25!94;UBERON:0002619!1.02e-22!22;UBERON:0001950!3.83e-22!20;UBERON:0000153!1.77e-20!129;UBERON:0007811!1.77e-20!129;UBERON:0000956!1.29e-19!25;UBERON:0000203!1.29e-19!25;UBERON:0000033!3.60e-18!123;UBERON:0002308!4.75e-18!9;UBERON:0000125!4.75e-18!9;UBERON:0004121!4.37e-15!169;UBERON:0002298!1.43e-14!8;UBERON:0000924!1.71e-14!173;UBERON:0006601!1.71e-14!173;UBERON:0002420!1.34e-13!9;UBERON:0007245!1.34e-13!9;UBERON:0010009!1.34e-13!9;UBERON:0010011!1.34e-13!9;UBERON:0000454!1.34e-13!9;UBERON:0009663!1.65e-13!7;UBERON:0000025!5.02e-13!194;UBERON:0000064!8.39e-11!219;UBERON:0004111!1.09e-09!241;UBERON:0000200!1.61e-09!6;UBERON:0000483!5.29e-09!309;UBERON:0000119!8.45e-09!312;UBERON:0006331!9.05e-09!3;UBERON:0000477!9.92e-09!286;UBERON:0002021!1.81e-08!5;UBERON:0001872!3.24e-08!5;UBERON:0000988!3.39e-08!3;UBERON:0002771!1.15e-07!3;UBERON:0000475!3.25e-07!365;UBERON:0001871!4.29e-07!7;UBERON:0003076!5.77e-07!15;UBERON:0003057!5.77e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!4.07e-49!115;UBERON:0001049!7.32e-46!57;UBERON:0005068!7.32e-46!57;UBERON:0006241!7.32e-46!57;UBERON:0007135!7.32e-46!57;UBERON:0002616!3.44e-41!59;UBERON:0003080!3.61e-41!42;UBERON:0002780!4.55e-39!41;UBERON:0001890!4.55e-39!41;UBERON:0006240!4.55e-39!41;UBERON:0002020!1.51e-34!34;UBERON:0003528!1.51e-34!34;UBERON:0001893!2.13e-34!34;UBERON:0000955!3.02e-33!69;UBERON:0006238!3.02e-33!69;UBERON:0003075!1.15e-32!86;UBERON:0007284!1.15e-32!86;UBERON:0002791!1.51e-32!33;UBERON:0002346!9.51e-31!90;UBERON:0001017!3.13e-30!82;UBERON:0001869!3.48e-30!32;UBERON:0005743!2.20e-28!86;UBERON:0003056!5.64e-26!61;UBERON:0000073!8.53e-25!94;UBERON:0001016!8.53e-25!94;UBERON:0002619!1.02e-22!22;UBERON:0001950!3.83e-22!20;UBERON:0000153!1.77e-20!129;UBERON:0007811!1.77e-20!129;UBERON:0000956!1.29e-19!25;UBERON:0000203!1.29e-19!25;UBERON:0000033!3.60e-18!123;UBERON:0002308!4.75e-18!9;UBERON:0000125!4.75e-18!9;UBERON:0004121!4.37e-15!169;UBERON:0002298!1.43e-14!8;UBERON:0000924!1.71e-14!173;UBERON:0006601!1.71e-14!173;UBERON:0002420!1.34e-13!9;UBERON:0007245!1.34e-13!9;UBERON:0010009!1.34e-13!9;UBERON:0010011!1.34e-13!9;UBERON:0000454!1.34e-13!9;UBERON:0009663!1.65e-13!7;UBERON:0000025!5.02e-13!194;UBERON:0000064!8.39e-11!219;UBERON:0004111!1.09e-09!241;UBERON:0000200!1.61e-09!6;UBERON:0000483!5.29e-09!309;UBERON:0000119!8.45e-09!312;UBERON:0006331!9.05e-09!3;UBERON:0000477!9.92e-09!286;UBERON:0002021!1.81e-08!5;UBERON:0001872!3.24e-08!5;UBERON:0000988!3.39e-08!3;UBERON:0002771!1.15e-07!3;UBERON:0000475!3.25e-07!365;UBERON:0001871!4.29e-07!7;UBERON:0003076!5.77e-07!15;UBERON:0003057!5.77e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000989;1.44e-15;1!UBERON:0008811;1.44e-15;1!UBERON:0001874;2.56e-15;1!UBERON:0009663;6.06e-09;7!UBERON:0001875;2.57e-08;2!UBERON:0006514;2.57e-08;2!UBERON:0002420;3.78e-07;9!UBERON:0000125;3.78e-07;9!UBERON:0007245;3.78e-07;9!UBERON:0002308;3.78e-07;9!UBERON:0010009;3.78e-07;9!UBERON:0010011;3.78e-07;9!UBERON:0000454;3.78e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.54e-15,1;UBERON:0008811,1.54e-15,1;UBERON:0006258,1.54e-15,1;UBERON:0005876,1.54e-15,1;UBERON:0004874,1.54e-15,1;UBERON:0001874,2.75e-15,1;UBERON:0009663,6.56e-09,7;UBERON:0001875,2.87e-08,2;UBERON:0006514,2.87e-08,2;UBERON:0002420,4.03e-07,9;UBERON:0000125,4.03e-07,9;UBERON:0007245,4.03e-07,9;UBERON:0002308,4.03e-07,9;UBERON:0010009,4.03e-07,9;UBERON:0010011,4.03e-07,9;UBERON:0000454,4.03e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.50377859655677,0.611030144933625,0,0,0,0.741412462787447,0,1.1713222286267,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0.496166021811951,0,0,0,16.3205341010842,4.2617281983859,7.96498499585,24.2625746725255,0,0,0.366078794705889,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,6.23552988286043,3.05589132720735,1.96278473107013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.638535436228605,0.205116364240755,0.756215088665154,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.202612753855184,0.781078098613847,0,0.253663240775627,0.546974809018219,0,2.48105589194647,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0.639701945702943,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.50377859655677,0.611030144933625,0,0,0,0.741412462787447,0,1.1713222286267,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0.496166021811951,0,0,0,16.3205341010842,4.2617281983859,7.96498499585,24.2625746725255,0,0,0.366078794705889,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,6.23552988286043,3.05589132720735,1.96278473107013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.638535436228605,0.205116364240755,0.756215088665154,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.202612753855184,0.781078098613847,0,0.253663240775627,0.546974809018219,0,2.48105589194647,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0.639701945702943,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p5@ACVR1C | |short_description=p5@ACVR1C | ||
}} | }} |
Latest revision as of 17:47, 17 September 2015
Short description: | p5@ACVR1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACVR1C_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -3bp_to_ENST00000335450, ENST00000348328_5end |
EntrezGene: | ACVR1C |
HGNC: | 18123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.79e-26 | 5 |
fat cell | 8.98e-16 | 15 |
conventional dendritic cell | 6.53e-15 | 8 |
dendritic cell | 2.58e-12 | 10 |
Ontology term | p-value | n |
---|---|---|
penis | 1.54e-15 | 1 |
intromittent organ | 1.54e-15 | 1 |
lateral plate mesenchyme | 1.54e-15 | 1 |
undifferentiated genital tubercle | 1.54e-15 | 1 |
somatopleure | 1.54e-15 | 1 |
putamen | 2.75e-15 | 1 |
telencephalic nucleus | 6.56e-09 | 7 |
globus pallidus | 2.87e-08 | 2 |
pallidum | 2.87e-08 | 2 |
basal ganglion | 4.03e-07 | 9 |
neural nucleus | 4.03e-07 | 9 |
nuclear complex of neuraxis | 4.03e-07 | 9 |
nucleus of brain | 4.03e-07 | 9 |
aggregate regional part of brain | 4.03e-07 | 9 |
collection of basal ganglia | 4.03e-07 | 9 |
cerebral subcortex | 4.03e-07 | 9 |