FFCP PHASE1:Hg19::chr2:159976494..159976506,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:159976494..159976506,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr2:159976494..159976506,+ | |description=CAGE_peak_at_chr2:159976494..159976506,+ | ||
|id=chr2:159976494..159976506,+ | |id=chr2:159976494..159976506,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.56e-25!5;CL:0000457!2.56e-25!5;CL:0002191!2.56e-25!5;CL:0000097!2.56e-25!5;CL:0000831!2.56e-25!5;CL:0002028!2.56e-25!5;CL:0000163!1.34e-21!9;CL:0002174!4.19e-09!1;CL:0000501!4.19e-09!1 | |ontology_enrichment_celltype=CL:0002274!2.56e-25!5;CL:0000457!2.56e-25!5;CL:0002191!2.56e-25!5;CL:0000097!2.56e-25!5;CL:0000831!2.56e-25!5;CL:0002028!2.56e-25!5;CL:0000163!1.34e-21!9;CL:0002174!4.19e-09!1;CL:0000501!4.19e-09!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.45e-26;1!UBERON:0000358;4.61e-26;1!UBERON:0005062;6.32e-26;4!UBERON:0007284;6.32e-26;4!UBERON:0010226;8.64e-26;1 | |||
|ontology_enrichment_disease=DOID:114!8.55e-17!2;DOID:178!3.58e-09!1;DOID:326!3.58e-09!1;DOID:3978!3.58e-09!1;DOID:3394!3.58e-09!1;DOID:5844!3.58e-09!1;DOID:1287!7.57e-09!4 | |ontology_enrichment_disease=DOID:114!8.55e-17!2;DOID:178!3.58e-09!1;DOID:326!3.58e-09!1;DOID:3978!3.58e-09!1;DOID:3394!3.58e-09!1;DOID:5844!3.58e-09!1;DOID:1287!7.57e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.29e-13;2!DOID:1287;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.21e-13,2;DOID:1287,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!8.50e-18!27;UBERON:0003978!8.35e-12!3;UBERON:0009751!8.35e-12!3;UBERON:0000946!8.35e-12!3;UBERON:0002523!8.35e-12!3;UBERON:0005983!8.35e-12!3;UBERON:0002165!8.35e-12!3;UBERON:0002062!8.35e-12!3;UBERON:0007280!8.35e-12!3;UBERON:0004151!1.66e-11!3;UBERON:0002135!1.60e-09!1;UBERON:0002146!1.89e-09!1;UBERON:0005623!1.89e-09!1;UBERON:0002084!2.22e-09!1;UBERON:0002082!2.22e-09!1;UBERON:0004706!2.22e-09!1;UBERON:0002079!3.88e-09!1;UBERON:0000948!3.40e-08!24;UBERON:0005498!3.40e-08!24;UBERON:0004140!3.40e-08!24;UBERON:0009881!3.40e-08!24;UBERON:0004141!3.40e-08!24;UBERON:0003084!3.40e-08!24;UBERON:0007005!3.40e-08!24;UBERON:0004139!3.40e-08!24;UBERON:0004291!3.40e-08!24;UBERON:0003103!6.86e-08!69;UBERON:0000013!5.82e-07!5;UBERON:0002410!5.82e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.24e-35;25!UBERON:0003978;3.62e-34;3!UBERON:0000946;3.62e-34;3!UBERON:0002135;2.45e-26;1!UBERON:0002146;3.58e-26;1!UBERON:0005623;3.58e-26;1!UBERON:0002084;8.64e-26;1!UBERON:0002082;8.64e-26;1!UBERON:0000948;1.49e-18;22!UBERON:0002133;6.85e-14;2!UBERON:0010313;5.28e-11;10!UBERON:0004151;1.60e-09;3!UBERON:0003103;1.59e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.33e-34,3;UBERON:0009751,3.33e-34,3;UBERON:0000946,3.33e-34,3;UBERON:0002523,3.33e-34,3;UBERON:0005983,3.33e-34,3;UBERON:0002165,3.33e-34,3;UBERON:0002062,3.33e-34,3;UBERON:0007280,3.33e-34,3;UBERON:0007100,4.95e-33,27;UBERON:0002135,2.16e-26,1;UBERON:0002146,3.58e-26,1;UBERON:0005623,3.58e-26,1;UBERON:0002084,5.93e-26,1;UBERON:0002082,5.93e-26,1;UBERON:0010226,5.93e-26,1;UBERON:0000948,4.43e-17,24;UBERON:0005498,4.43e-17,24;UBERON:0004140,4.43e-17,24;UBERON:0009881,4.43e-17,24;UBERON:0004141,4.43e-17,24;UBERON:0003084,4.43e-17,24;UBERON:0007005,4.43e-17,24;UBERON:0004139,4.43e-17,24;UBERON:0004291,4.43e-17,24;UBERON:0004797,2.65e-15,7;UBERON:0002133,6.43e-14,2;UBERON:0003103,3.00e-13,68;UBERON:0010313,5.15e-11,10;UBERON:0002342,5.15e-11,10;UBERON:0005062,5.15e-11,10;UBERON:0004151,1.41e-09,3;UBERON:0001009,4.56e-08,112 | |||
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|short_description=p@chr2:159976494..159976506,+ | |short_description=p@chr2:159976494..159976506,+ | ||
}} | }} |
Latest revision as of 01:44, 29 July 2015
Short description: | p@chr2:159976494..159976506, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:159976494..159976506, + |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 3.33e-34 | 3 |
cardiac mesenchyme | 3.33e-34 | 3 |
cardial valve | 3.33e-34 | 3 |
tunica intima | 3.33e-34 | 3 |
heart layer | 3.33e-34 | 3 |
endocardium | 3.33e-34 | 3 |
endocardial cushion | 3.33e-34 | 3 |
presumptive endocardium | 3.33e-34 | 3 |
primary circulatory organ | 4.95e-33 | 27 |
mitral valve | 2.16e-26 | 1 |
pulmonary valve | 3.58e-26 | 1 |
semi-lunar valve | 3.58e-26 | 1 |
heart left ventricle | 5.93e-26 | 1 |
cardiac ventricle | 5.93e-26 | 1 |
future cardiac ventricle | 5.93e-26 | 1 |
heart | 4.43e-17 | 24 |
primitive heart tube | 4.43e-17 | 24 |
primary heart field | 4.43e-17 | 24 |
anterior lateral plate mesoderm | 4.43e-17 | 24 |
heart tube | 4.43e-17 | 24 |
heart primordium | 4.43e-17 | 24 |
cardiac mesoderm | 4.43e-17 | 24 |
cardiogenic plate | 4.43e-17 | 24 |
heart rudiment | 4.43e-17 | 24 |
blood vessel layer | 2.65e-15 | 7 |
atrioventricular valve | 6.43e-14 | 2 |
compound organ | 3.00e-13 | 68 |
neural crest-derived structure | 5.15e-11 | 10 |
neural crest | 5.15e-11 | 10 |
neural fold | 5.15e-11 | 10 |
cardiac chamber | 1.41e-09 | 3 |
circulatory system | 4.56e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.21e-13 | 2 |
cardiovascular system disease | 1.80e-07 | 4 |