FFCP PHASE1:Hg19::chr2:21266935..21266951,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114,Q59HB3,Q7Z7Q0 | |UniProt=P04114,Q59HB3,Q7Z7Q0 | ||
|association_with_transcript=0bp_to_ENST00000233242,NM_000384,uc002red.2_5end | |association_with_transcript=0bp_to_ENST00000233242,NM_000384,uc002red.2_5end | ||
|cluster_id=chr2:21266935..21266951,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_APOB_5end | |description=CAGE_peak_1_at_APOB_5end | ||
|id=chr2:21266935..21266951,- | |id=chr2:21266935..21266951,- | ||
|ontology_enrichment_celltype=CL:0000181!2.72e-11!12;CL:0000417!2.72e-11!12;CL:0000668!2.72e-11!12;CL:0000414!2.72e-11!12;CL:0000412!2.72e-11!12;CL:0000182!2.72e-11!12;CL:0002322!7.24e-07!5 | |ontology_enrichment_celltype=CL:0000181!2.72e-11!12;CL:0000417!2.72e-11!12;CL:0000668!2.72e-11!12;CL:0000414!2.72e-11!12;CL:0000412!2.72e-11!12;CL:0000182!2.72e-11!12;CL:0002322!7.24e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.17e-19;12!CL:0002561;1.03e-07;2!CL:0002322;5.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.17e-19,12;CL:0002561,9.09e-08,2;CL:0002322,5.51e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.45e-16;11!UBERON:0003104;2.48e-14;31!UBERON:0009497;7.66e-14;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;8.47e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.90e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-22!115;UBERON:0005057!3.91e-17!26;UBERON:0002107!1.60e-14!19;UBERON:0006925!1.60e-14!19;UBERON:0008836!1.60e-14!19;UBERON:0009854!2.76e-13!23;UBERON:0008835!4.35e-12!22;UBERON:0003894!4.35e-12!22;UBERON:0009497!5.10e-12!25;UBERON:0000015!5.10e-12!25;UBERON:0002423!5.10e-12!25;UBERON:0006235!5.10e-12!25;UBERON:0004161!5.10e-12!25;UBERON:0002368!2.29e-11!35;UBERON:0003929!2.43e-11!54;UBERON:0009856!2.44e-11!26;UBERON:0007499!3.00e-10!25;UBERON:0004921!5.51e-09!129;UBERON:0004185!5.51e-09!129;UBERON:0000949!6.57e-08!45;UBERON:0005172!7.38e-08!55;UBERON:0005173!7.38e-08!55;UBERON:0001007!8.62e-08!155;UBERON:0001555!8.62e-08!155;UBERON:0007026!8.62e-08!155;UBERON:0002365!1.14e-07!31;UBERON:0002330!1.14e-07!31;UBERON:0002417!1.54e-07!61;UBERON:0000916!1.54e-07!61;UBERON:0004119!1.79e-07!169;UBERON:0000925!1.79e-07!169;UBERON:0006595!1.79e-07!169;UBERON:0005409!6.37e-07!35;UBERON:0002530!9.48e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.01e-22;19!UBERON:0006925;2.01e-22;19!UBERON:0002423;1.95e-16;25!UBERON:0002365;1.46e-12;31!UBERON:0002330;1.46e-12;31!UBERON:0000160;3.21e-12;17!UBERON:0005409;1.10e-11;22!UBERON:0002368;5.11e-11;33!UBERON:0000922;6.46e-09;49!UBERON:0001007;2.38e-08;81!UBERON:0005172;6.74e-08;52!UBERON:0005173;6.74e-08;52!UBERON:0005933;1.03e-07;2!UBERON:0005942;1.03e-07;2!UBERON:0005932;1.03e-07;2!UBERON:0002108;1.67e-07;4!UBERON:0004921;3.68e-07;33!UBERON:0000949;4.36e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.09e-22,19;UBERON:0006925,2.09e-22,19;UBERON:0008836,2.09e-22,19;UBERON:0008835,5.26e-19,22;UBERON:0003894,5.26e-19,22;UBERON:0009854,4.53e-18,23;UBERON:0007499,2.01e-16,25;UBERON:0009497,2.01e-16,25;UBERON:0000015,2.01e-16,25;UBERON:0002423,2.01e-16,25;UBERON:0006235,2.01e-16,25;UBERON:0004161,2.01e-16,25;UBERON:0009856,1.07e-15,26;UBERON:0002365,9.14e-13,31;UBERON:0002330,9.14e-13,31;UBERON:0005409,1.61e-12,25;UBERON:0000160,3.21e-12,17;UBERON:0005172,6.03e-12,54;UBERON:0005173,6.03e-12,54;UBERON:0002417,7.10e-12,60;UBERON:0000916,7.10e-12,60;UBERON:0002368,4.99e-11,35;UBERON:0004921,6.00e-11,118;UBERON:0003929,1.29e-10,54;UBERON:0000949,4.72e-08,45;UBERON:0001007,6.49e-08,145;UBERON:0001555,6.49e-08,145;UBERON:0007026,6.49e-08,145;UBERON:0005933,9.09e-08,2;UBERON:0005942,9.09e-08,2;UBERON:0005932,9.09e-08,2;UBERON:0002108,1.67e-07,4;UBERON:0002530,9.31e-07,59 | |||
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|phase1_expression=0.363356758541113,0.856402095563933,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,15.1935727577347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,19.8691642306876,11.7136992167369,13.6253259472839,0.36497735907583,0,0,0,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,4376.85135239782,2422.66908911035,4647.15340595592,0,205.882646121172,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,120.859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1713.05681864338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1718.5950831801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36968812325356,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,154.12390662914,0,0,0,0,27.5499838665222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,86.9321389318736,0,0,835.481696734038,234.635575654512,0,0,0,0.202203398942031,0,1.1713222286267,0,0,0,0,464.604349626869,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,13.8991948268191,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52076466412852,0.717873024576814,3.79390100948083,2.57535628881943,1.11585728720936,0.268733889946905,0,1298.92983723111,2843.75774856154,2720.38265344554,2764.48894763554,23.7210230450545,0,0,0,0,0,0.415440338029185,0,0,0,0,1.10327990218877,2.93745693555989,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,4356.11859384732,6276.85132777192,0,0,0,0,0,0,0,0,0,0,0,7.07223144380316,4.2617281983859,9.80305845643077,24.2625746725255,0,0,0,0,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.607838261565552,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0.560544326627578,42.0053011434368,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04794812455674,0,0.205325613712494,1.1598144313382,5.34282092365053,0,0,0,0,0,0,2545.58960519055,1079.24710976854,0,0,0,0,0,1.6906229103336,0,0.0939839179798536,24.9452026457744,0,0,0,0,31.4044646946002,0,0.143339583151451,0,0,0,308.951674860994,0,0,0,0,0,0,0,0.26721740526556,0,0.50141507858475,1.06090177505535,0.535928260312357,0,0,0.426467963801962,0,0.0645889098360061,0.682821857254437,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0,1.14755528628282,0,0,0,0,0,14.0784565442073,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p1@APOB | |short_description=p1@APOB | ||
}} | }} |
Latest revision as of 00:27, 20 September 2015
Short description: | p1@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000233242, NM_000384, uc002red.2_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114Q59HB3Q7Z7Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.17e-19 | 12 |
outer root sheath cell | 9.09e-08 | 2 |
embryonic stem cell | 5.51e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.09e-22 | 19 |
digestive gland | 2.09e-22 | 19 |
liver bud | 2.09e-22 | 19 |
hepatic diverticulum | 5.26e-19 | 22 |
liver primordium | 5.26e-19 | 22 |
digestive tract diverticulum | 4.53e-18 | 23 |
epithelial sac | 2.01e-16 | 25 |
epithelium of foregut-midgut junction | 2.01e-16 | 25 |
anatomical boundary | 2.01e-16 | 25 |
hepatobiliary system | 2.01e-16 | 25 |
foregut-midgut junction | 2.01e-16 | 25 |
septum transversum | 2.01e-16 | 25 |
sac | 1.07e-15 | 26 |
exocrine gland | 9.14e-13 | 31 |
exocrine system | 9.14e-13 | 31 |
gastrointestinal system | 1.61e-12 | 25 |
intestine | 3.21e-12 | 17 |
abdomen element | 6.03e-12 | 54 |
abdominal segment element | 6.03e-12 | 54 |
abdominal segment of trunk | 7.10e-12 | 60 |
abdomen | 7.10e-12 | 60 |
endocrine gland | 4.99e-11 | 35 |
subdivision of digestive tract | 6.00e-11 | 118 |
gut epithelium | 1.29e-10 | 54 |
endocrine system | 4.72e-08 | 45 |
digestive system | 6.49e-08 | 145 |
digestive tract | 6.49e-08 | 145 |
primitive gut | 6.49e-08 | 145 |
hair root sheath | 9.09e-08 | 2 |
hair outer root sheath | 9.09e-08 | 2 |
bulb of hair follicle | 9.09e-08 | 2 |
small intestine | 1.67e-07 | 4 |
gland | 9.31e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.90e-08 | 2 |