FFCP PHASE1:Hg19::chr2:216285416..216285421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216285416..216285421,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216285416..216285421,- | |description=CAGE_peak_at_chr2:216285416..216285421,- | ||
|id=chr2:216285416..216285421,- | |id=chr2:216285416..216285421,- | ||
|ontology_enrichment_celltype=CL:0000057!1.38e-25!75;CL:0000055!6.77e-22!180;CL:0002620!1.17e-14!23;CL:0000048!1.20e-14!430;CL:0002371!1.42e-14!591;CL:0000723!2.93e-14!436;CL:0000034!1.13e-13!444;CL:0002320!1.27e-12!365;CL:0000144!6.43e-12!625;CL:0000134!4.40e-11!358;CL:0000219!5.66e-10!390;CL:0000499!6.50e-10!27;CL:0000548!2.36e-08!679;CL:0000004!2.36e-08!679;CL:0000255!2.36e-08!679;CL:0000012!4.33e-08!682 | |ontology_enrichment_celltype=CL:0000057!1.38e-25!75;CL:0000055!6.77e-22!180;CL:0002620!1.17e-14!23;CL:0000048!1.20e-14!430;CL:0002371!1.42e-14!591;CL:0000723!2.93e-14!436;CL:0000034!1.13e-13!444;CL:0002320!1.27e-12!365;CL:0000144!6.43e-12!625;CL:0000134!4.40e-11!358;CL:0000219!5.66e-10!390;CL:0000499!6.50e-10!27;CL:0000548!2.36e-08!679;CL:0000004!2.36e-08!679;CL:0000255!2.36e-08!679;CL:0000012!4.33e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0002549;1.14e-07;2!CL:0002494;3.29e-07;16!CL:0000134;4.27e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.51e-13,76;CL:0002320,6.79e-09,361;CL:0000134,6.78e-08,354;CL:0002549,1.50e-07,2;CL:0002494,3.15e-07,16;CL:0000048,3.82e-07,427;CL:0000219,5.65e-07,386;CL:0000723,6.62e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.95e-07!14 | |ontology_enrichment_disease=DOID:2394!7.95e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.02e-14!375;UBERON:0002199!5.49e-12!45;UBERON:0002416!5.49e-12!45;UBERON:0002097!3.06e-10!40;UBERON:0000478!1.48e-07!24;UBERON:0003102!2.56e-07!95;UBERON:0005631!5.94e-07!14;UBERON:0000158!5.94e-07!14 | |ontology_enrichment_uberon=UBERON:0002384!6.02e-14!375;UBERON:0002199!5.49e-12!45;UBERON:0002416!5.49e-12!45;UBERON:0002097!3.06e-10!40;UBERON:0000478!1.48e-07!24;UBERON:0003102!2.56e-07!95;UBERON:0005631!5.94e-07!14;UBERON:0000158!5.94e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.82e-09;10!UBERON:0000158;9.82e-09;10!UBERON:0005629;1.14e-07;2!UBERON:0005358;1.14e-07;2!UBERON:0001886;1.14e-07;2!UBERON:0004086;1.14e-07;2!UBERON:0005282;1.14e-07;2!UBERON:0005281;1.14e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.08e-11,371;UBERON:0005629,1.50e-07,2;UBERON:0005358,1.50e-07,2;UBERON:0001886,1.50e-07,2;UBERON:0004086,1.50e-07,2;UBERON:0005282,1.50e-07,2;UBERON:0005281,1.50e-07,2 | |||
|phase1_expression=0.54503513781167,1.2846031433459,0.281908808191942,6.00439790118782,0.893922188854576,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0.873765488520689,1.05506791291381,0,1.32558950291166,0,1.20538905604795,0,0,0.492484232307152,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,10.3387173116643,6.8128881842369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0.886413581652058,0.264818361626438,8.03142538096678,0.709336764396714,0.560677600142307,1.06748995729705,1.2333377420858,0.311211035399766,1.61652806483626,0.490385709340376,1.21085942115945,1.15235184896,0,1.24864030732128,0,1.49448680551801,0.23486899728753,0.485618833104395,0.421352420106746,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,0.717558542755448,0.427114777637135,1.05965950579781,2.10063767259082,0.618315175430633,2.83404594050192,0.37223371266318,0.168776332241266,0.779496041289589,4.54380793639406,0.184099797284599,0.80823028409406,4.61512470271599,0.705264687593482,0.339121184620975,0,0,0,0,0,0.232387885739037,0,0,0,0,2.57296375277154,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0.982827216677626,1.18157981336281,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.336393253036082,0.87192013766656,0,0.258543431515556,0,0,0.26593811658487,0,0.514414748524284,2.83698264046557,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.958499421966331,2.29723871668228,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.415941723061614,2.14114786556594,0,0.234282829985426,0,4.5481500811197,0,0.664225598535437,0.921845842708516,0.173767228936166,0.783204629850962,2.40200396667599,0,0,0,0,0,0.30239029332968,0.248107807818777,2.60885354589706,1.96462066103151,0.384417447767103,0,1.12597744800525,2.96836132889982,0.462629081407967,0.887808626565635,0,0,0.348631135379878,0.120859449591622,0.601519410909855,0,0,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0.308097234229289,0.767518373630648,0.964856007391714,0.644521469209642,1.0151168573996,0.340906509664404,0.0890320356467374,0.165284915360978,0.384380134730212,0.127612712494584,0.30347334256665,0.464845549297286,3.1481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.953150969619124,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.296964680832639,1.53580351049616,0,0,1.22439575525196,0,0,0.398495976502139,0,0,0,0,4.3545542272653,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,4.78501739597879,0.549585560411174,16.5240780565777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0.429226048136571,0,0,2.16179930125442,0,0,0.164831716762333,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.717149357331379,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,1.02232813071253,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0.554805861502613,0.947015026375446,1.76097531226803,2.66943366478961,1.37304041038154,2.7221566277383,0.15543720058278,0,0.318593534327405,0,0.621051827505038,0.414706207840855,4.51930914748591,1.04349012362347,0.150257608997218,0,0.813741466409323,0.727394636810238,0.751873899297419,1.39210127963548,0.398095888698616,0,0,1.34699795506368,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,1.41539347670307,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.41193548092464,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0.414432328326074,0,0.691259661814092,0,0,0,0.42338705019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| ||
|short_description=p@chr2:216285416..216285421,- | |short_description=p@chr2:216285416..216285421,- | ||
}} | }} |
Latest revision as of 06:13, 29 July 2015
Short description: | p@chr2:216285416..216285421, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216285416..216285421, - |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.51e-13 | 76 |
connective tissue cell | 6.79e-09 | 361 |
mesenchymal cell | 6.78e-08 | 354 |
fibroblast of choroid plexus | 1.50e-07 | 2 |
cardiocyte | 3.15e-07 | 16 |
multi fate stem cell | 3.82e-07 | 427 |
motile cell | 5.65e-07 | 386 |
somatic stem cell | 6.62e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.08e-11 | 371 |
vascular plexus | 1.50e-07 | 2 |
ventricle of nervous system | 1.50e-07 | 2 |
choroid plexus | 1.50e-07 | 2 |
brain ventricle | 1.50e-07 | 2 |
ventricular system of brain | 1.50e-07 | 2 |
ventricular system of central nervous system | 1.50e-07 | 2 |