FFCP PHASE1:Hg19::chr2:241625719..241625734,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B5MCK9 | |UniProt=B5MCK9 | ||
|association_with_transcript=-16bp_to_ENST00000407635_5end | |association_with_transcript=-16bp_to_ENST00000407635_5end | ||
|cluster_id=chr2:241625719..241625734,+ | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_3_at_ENST00000407635_5end | |description=CAGE_peak_3_at_ENST00000407635_5end | ||
|id=chr2:241625719..241625734,+ | |id=chr2:241625719..241625734,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.02e-10!7;CL:0000586!3.02e-10!7;CL:0002127!6.72e-09!1;CL:0000914!6.72e-09!1;CL:0000911!6.72e-09!1;CL:0000814!6.72e-09!1;CL:0002042!6.72e-09!1;CL:0002039!6.72e-09!1;CL:0002040!6.72e-09!1;CL:0002041!6.72e-09!1 | |ontology_enrichment_celltype=CL:0000039!3.02e-10!7;CL:0000586!3.02e-10!7;CL:0002127!6.72e-09!1;CL:0000914!6.72e-09!1;CL:0000911!6.72e-09!1;CL:0000814!6.72e-09!1;CL:0002042!6.72e-09!1;CL:0002039!6.72e-09!1;CL:0002040!6.72e-09!1;CL:0002041!6.72e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.07e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.27e-17,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;1.22e-09;4!DOID:4362;7.01e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.22e-09,4;DOID:4362,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000160!7.19e-17!27;UBERON:0005409!7.00e-13!35;UBERON:0003408!1.97e-12!10;UBERON:0009722!3.53e-11!11;UBERON:0007690!3.53e-11!11;UBERON:0001007!9.70e-10!155;UBERON:0001555!9.70e-10!155;UBERON:0007026!9.70e-10!155;UBERON:0004921!3.92e-09!129;UBERON:0004185!3.92e-09!129;UBERON:0001831!4.19e-09!1;UBERON:0001567!4.19e-09!1;UBERON:0008801!4.19e-09!1;UBERON:0001301!5.75e-09!1;UBERON:0002372!7.85e-09!1;UBERON:0001961!7.85e-09!1;UBERON:0001744!7.85e-09!1;UBERON:0001735!7.85e-09!1;UBERON:0004119!1.08e-08!169;UBERON:0000925!1.08e-08!169;UBERON:0006595!1.08e-08!169;UBERON:0002108!1.22e-08!14;UBERON:0002370!2.22e-08!4;UBERON:0005058!2.22e-08!4;UBERON:0009113!2.22e-08!4;UBERON:0003295!2.22e-08!4;UBERON:0005562!2.22e-08!4;UBERON:0008814!3.07e-08!15;UBERON:0000974!2.14e-07!10;UBERON:0001042!2.92e-07!10;UBERON:0009145!2.92e-07!10;UBERON:0002046!5.00e-07!5;UBERON:0004117!5.00e-07!5;UBERON:0007689!5.00e-07!5;UBERON:0007123!5.00e-07!5;UBERON:0003091!5.00e-07!5;UBERON:0000059!5.65e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.07e-17;2!UBERON:0004801;1.07e-17;2!UBERON:0000160;3.12e-17;17!UBERON:0005409;1.15e-13;22!UBERON:0000059;4.80e-13;11!UBERON:0002114;2.89e-12;2!UBERON:0001052;1.57e-09;4!UBERON:0004921;4.51e-09;33!UBERON:0002108;7.01e-08;4!UBERON:0004907;7.01e-08;5!UBERON:0000002;8.97e-07;6!UBERON:0001560;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.27e-17,2;UBERON:0004801,1.27e-17,2;UBERON:0000160,2.95e-17,17;UBERON:0000059,4.52e-13,11;UBERON:0002114,2.89e-12,2;UBERON:0005409,3.38e-12,25;UBERON:0001052,1.44e-09,4;UBERON:0004907,6.55e-08,5;UBERON:0002108,7.01e-08,4;UBERON:0000002,9.49e-07,6;UBERON:0001560,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,18.9419344929424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90757005616546,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.35969630113376,0.848915739187391,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952257725854961,0,0.0620747142958579,0,0.190941474834495,0.606351566874658,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,18.9419344929424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90757005616546,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.35969630113376,0.848915739187391,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952257725854961,0,0.0620747142958579,0,0.190941474834495,0.606351566874658,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENST00000407635 | |short_description=p3@ENST00000407635 | ||
}} | }} |
Latest revision as of 08:34, 16 September 2015
Short description: | p3@ENST00000407635 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000407635_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -16bp_to_ENST00000407635_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.27e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.27e-17 | 2 |
cervix epithelium | 1.27e-17 | 2 |
intestine | 2.95e-17 | 17 |
large intestine | 4.52e-13 | 11 |
duodenum | 2.89e-12 | 2 |
gastrointestinal system | 3.38e-12 | 25 |
rectum | 1.44e-09 | 4 |
lower digestive tract | 6.55e-08 | 5 |
small intestine | 7.01e-08 | 4 |
uterine cervix | 9.49e-07 | 6 |
neck of organ | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.22e-09 | 4 |
cervical cancer | 7.49e-08 | 5 |