FFCP PHASE1:Hg19::chr14:52118089..52118098,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:52118089..52118098,-
|short_description=p4@FRMD6-AS1
|description=CAGE_peak_4_at_FRMD6-AS1_5end
|association_with_transcript=363bp_to_NR_037676_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=145438 | |EntrezGene=145438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20129 | |HGNC=20129 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=363bp_to_NR_037676_5end | |||
|cluster_id=chr14:52118089..52118098,- | |||
|description=CAGE_peak_4_at_FRMD6-AS1_5end | |||
|id=chr14:52118089..52118098,- | |||
|ontology_enrichment_celltype=CL:0000055!9.58e-13!180;CL:0002620!1.88e-12!23;CL:0000057!1.14e-11!75 | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.26e-12;8!CL:0002620;1.57e-09;23!CL:0000511;1.53e-07;1!CL:0002625;1.53e-07;1!CL:0000222;1.53e-07;1!CL:0000216;1.53e-07;1!CL:0002591;1.53e-07;1!CL:1000306;2.17e-07;4!CL:0002547;2.17e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.23e-12,8;CL:0002620,1.37e-09,23;CL:0000511,9.44e-08,1;CL:0002625,9.44e-08,1;CL:0000216,9.44e-08,1;CL:0002591,1.91e-07,1;CL:1000306,2.40e-07,4;CL:0002547,2.40e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.30e-12;5!DOID:450;5.30e-12;5!DOID:66;5.30e-12;5!DOID:423;5.30e-12;5!DOID:0080000;5.30e-12;5!DOID:11722;5.30e-12;5!DOID:5093;3.94e-07;4!DOID:1612;3.94e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.75e-12,5;DOID:450,2.75e-12,5;DOID:66,2.75e-12,5;DOID:423,2.75e-12,5;DOID:0080000,2.75e-12,5;DOID:11722,2.75e-12,5;DOID:5093,2.40e-07,4;DOID:1612,2.40e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.53e-07;1!UBERON:0001343;1.53e-07;1!UBERON:0007195;1.53e-07;1!UBERON:0004910;1.53e-07;1!UBERON:0004813;1.53e-07;1!UBERON:0004797;2.17e-07;4!UBERON:0000415;2.17e-07;4!UBERON:0007240;2.17e-07;4!UBERON:0005742;2.17e-07;4!UBERON:0005734;2.17e-07;4!UBERON:0004664;2.17e-07;4!UBERON:0004663;2.17e-07;4!UBERON:0001013;2.88e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.44e-08,1;UBERON:0001343,9.44e-08,1;UBERON:0004910,9.44e-08,1;UBERON:0005154,9.44e-08,1;UBERON:0005295,9.44e-08,1;UBERON:0004813,9.44e-08,1;UBERON:0005297,9.44e-08,1;UBERON:0005294,9.44e-08,1;UBERON:0010141,9.44e-08,1;UBERON:0005891,9.44e-08,1;UBERON:0007195,2.04e-07,1;UBERON:0000415,2.40e-07,4;UBERON:0007240,2.40e-07,4;UBERON:0005742,2.40e-07,4;UBERON:0005734,2.40e-07,4;UBERON:0004664,2.40e-07,4;UBERON:0004663,2.40e-07,4;UBERON:0001013,2.84e-07,14;UBERON:0002097,7.20e-07,41 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0.408001382488506,0,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,2.43317435151318,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0.71153252537342,0,0.402829317109147,0.760272105718513,2.19655851793353,0,0.81014194788176,0.17859945656816,0.898117490504679,0.337834441449967,0,0,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,3.17782033951725,1.14734648299525,0,0,1.06748995729705,0,0,0.404132016209064,0,0.302714855289863,0,0,0.624320153660641,0,0.149448680551801,0.704606991862589,0.323745888736263,0.421352420106746,0.408308342509787,0.245668634623536,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.612975591598039,0.150238058906597,0,1.97328599257748,0.640672166455702,1.27159140695737,2.70081986475962,0.412210116953756,3.60696756063881,0.744467425326359,1.0126579934476,0.389748020644795,0.504867548488229,0.368199594569197,0.323292113637624,2.4850671476163,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0.36497735907583,0,0,0,0,2.16563844500876,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0.288732895522148,0.925971025153221,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,1.690605505112,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0.178428988797162,0,0.35142424497814,0.300946099727719,2.27407504055985,0,0,0.553107505625109,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.920771839728375,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0.462629081407967,0.710246901252508,0.328508624055237,0,0.464841513839837,0,0,0,0.229628896329213,0.182091168006717,0.393373244878272,0,0.231046011313244,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0,0,0,1.6068392984416,0,0.308097234229289,0.15350367472613,0.413509717453592,0.214840489736547,0.725083469571143,0.255679882248303,0.534192213880424,0,0,0.127612712494584,0.10115778085555,0,1.25924938732256,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.571890581771475,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0.823611089208164,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0.422250816255987,0,0,0,0,0.123084805461069,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.520855522170466,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0.341826167541004,0.23056390438806,0.359030577639089,0.108647371922008,0.31900115973192,0.274792780205587,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0.261177619741208,0,0.687944129886466,0,0.0730893170861856,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.316553979779393,0.195551382734803,0.240476460754601,0.213452994739353,0,0,0,0.686379991447858,0,0.248505071130865,0,0,0,0.203996435272644,0,1.20084057741958,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.134366944973453,0.720599767084807,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0.340776043570843,0.566560457600628,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0.415045904808692,0.124980407962107,0.151649117541648,0,0.235265819698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| ||
|short_description=p4@FRMD6-AS1 | |||
}} | }} |
Latest revision as of 05:14, 20 September 2015
Short description: | p4@FRMD6-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FRMD6-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 363bp_to_NR_037676_5end |
EntrezGene: | FRMD6-AS1 |
HGNC: | 20129 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.23e-12 | 8 |
skin fibroblast | 1.37e-09 | 23 |
androgen binding protein secreting cell | 9.44e-08 | 1 |
seminiferous tubule epithelial cell | 9.44e-08 | 1 |
Sertoli cell | 9.44e-08 | 1 |
smooth muscle cell of the pulmonary artery | 1.91e-07 | 1 |
fibroblast of tunica adventitia of artery | 2.40e-07 | 4 |
fibroblast of the aortic adventitia | 2.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.44e-08 | 1 |
seminiferous tubule of testis | 9.44e-08 | 1 |
epithelium of male gonad | 9.44e-08 | 1 |
epithelial cord | 9.44e-08 | 1 |
sex cord | 9.44e-08 | 1 |
seminiferous tubule epithelium | 9.44e-08 | 1 |
testis sex cord | 9.44e-08 | 1 |
genital ridge | 9.44e-08 | 1 |
primitive sex cord of indifferent gonad | 9.44e-08 | 1 |
coelomic epithelium | 9.44e-08 | 1 |
stroma of bone marrow | 2.04e-07 | 1 |
artery wall | 2.40e-07 | 4 |
tunica adventitia of artery | 2.40e-07 | 4 |
adventitia | 2.40e-07 | 4 |
tunica adventitia of blood vessel | 2.40e-07 | 4 |
aorta tunica adventitia | 2.40e-07 | 4 |
aorta wall | 2.40e-07 | 4 |
adipose tissue | 2.84e-07 | 14 |
skin of body | 7.20e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.75e-12 | 5 |
myotonic disease | 2.75e-12 | 5 |
muscle tissue disease | 2.75e-12 | 5 |
myopathy | 2.75e-12 | 5 |
muscular disease | 2.75e-12 | 5 |
myotonic dystrophy | 2.75e-12 | 5 |
thoracic cancer | 2.40e-07 | 4 |
breast cancer | 2.40e-07 | 4 |