FFCP PHASE1:Hg19::chr14:52327835..52327844,+: Difference between revisions
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|id=chr14:52327835..52327844,+
|short_description=p29@GNG2
|description=CAGE_peak_29_at_GNG2_5end
|association_with_transcript=-197bp_to_ENST00000554736_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54331 | |EntrezGene=54331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |HGNC=4404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-197bp_to_ENST00000554736_5end | |||
|cluster_id=chr14:52327835..52327844,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_29_at_GNG2_5end | |||
|id=chr14:52327835..52327844,+ | |||
|ontology_enrichment_celltype=CL:0000623!1.78e-24!3;CL:0000825!1.78e-24!3;CL:0000738!1.34e-20!140;CL:0001014!1.37e-16!2;CL:0001016!1.37e-16!2;CL:0000037!4.23e-16!172;CL:0000566!4.23e-16!172;CL:0000094!5.49e-16!8;CL:0000988!5.14e-15!182;CL:0002032!1.82e-13!165;CL:0000837!1.82e-13!165;CL:0000081!1.12e-11!11;CL:0000767!2.04e-11!3;CL:0002031!3.47e-11!124;CL:0002393!1.20e-08!9;CL:0002397!1.20e-08!9;CL:0000766!1.65e-08!76;CL:0000763!8.21e-08!112;CL:0000049!8.21e-08!112;CL:0000134!1.82e-07!358;CL:0002320!3.04e-07!365;CL:0002087!3.16e-07!119;CL:0000453!3.68e-07!5;CL:0000791!5.61e-07!18;CL:0000789!5.61e-07!18;CL:0002420!5.61e-07!18;CL:0002419!5.61e-07!18;CL:0000790!5.61e-07!18;CL:0002274!6.97e-07!5;CL:0000457!6.97e-07!5;CL:0002191!6.97e-07!5;CL:0000097!6.97e-07!5;CL:0000831!6.97e-07!5;CL:0002028!6.97e-07!5;CL:0000625!7.66e-07!11;CL:0000034!8.86e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.23e-59;3!CL:0002393;1.02e-30;6!CL:0002397;1.02e-30;6!CL:0000094;1.08e-22;8!CL:0000081;1.03e-16;11!CL:0001014;2.47e-11;2!CL:0001016;2.47e-11;2!CL:0000771;3.70e-11;2!CL:0000767;7.26e-08;3!CL:0000775;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.23e-59,3;CL:0000825,2.23e-59,3;CL:0000094,1.01e-22,8;CL:0002393,1.02e-20,9;CL:0002397,1.02e-20,9;CL:0000081,9.81e-17,11;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0001014,2.47e-11,2;CL:0001016,2.47e-11,2;CL:0000037,2.70e-11,168;CL:0000771,4.09e-11,2;CL:0000988,1.07e-10,177;CL:0000766,9.90e-10,72;CL:0000763,1.06e-08,108;CL:0000049,1.06e-08,108;CL:0000775,6.34e-08,3;CL:0000767,7.26e-08,3;CL:0002031,8.06e-08,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.12e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p29@GNG2 | |||
}} | }} |
Latest revision as of 05:44, 20 September 2015
Short description: | p29@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_GNG2_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -197bp_to_ENST00000554736_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.23e-59 | 3 |
pro-NK cell | 2.23e-59 | 3 |
granulocyte | 1.01e-22 | 8 |
intermediate monocyte | 1.02e-20 | 9 |
CD14-positive, CD16-positive monocyte | 1.02e-20 | 9 |
blood cell | 9.81e-17 | 11 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
CD1a-positive Langerhans cell | 2.47e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.47e-11 | 2 |
hematopoietic stem cell | 2.70e-11 | 168 |
eosinophil | 4.09e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
myeloid leukocyte | 9.90e-10 | 72 |
myeloid cell | 1.06e-08 | 108 |
common myeloid progenitor | 1.06e-08 | 108 |
neutrophil | 6.34e-08 | 3 |
basophil | 7.26e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.06e-08 | 120 |