FFCP PHASE1:Hg19::chr2:47601065..47601124,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4072 | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |HGNC=11529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=151bp_to_ENST00000490733_5end | |association_with_transcript=151bp_to_ENST00000490733_5end | ||
|cluster_id=chr2:47601065..47601124,+ | |||
|coexpression_cluster_id=C1908 | |||
|description=CAGE_peak_5_at_EPCAM_5end | |description=CAGE_peak_5_at_EPCAM_5end | ||
|id=chr2:47601065..47601124,+ | |id=chr2:47601065..47601124,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.10e-18!254;CL:0000223!1.16e-10!59;CL:0000039!2.72e-08!7;CL:0000586!2.72e-08!7;CL:0002076!8.20e-08!43 | |ontology_enrichment_celltype=CL:0000066!2.10e-18!254;CL:0000223!1.16e-10!59;CL:0000039!2.72e-08!7;CL:0000586!2.72e-08!7;CL:0002076!8.20e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.58e-12;7!CL:0000586;6.58e-12;7!CL:0002322;4.93e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.10e-14,253;CL:0000039,1.16e-11,7;CL:0000586,1.16e-11,7;CL:0002322,4.54e-11,5;CL:0000223,1.87e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.62e-08;10!UBERON:0005564;5.62e-08;10 | |||
|ontology_enrichment_disease=DOID:305!6.30e-34!106;DOID:0050687!6.91e-23!143;DOID:299!9.42e-12!25;DOID:162!8.95e-11!235;DOID:14566!4.27e-10!239;DOID:1749!4.93e-10!14;DOID:7!9.24e-07!39 | |ontology_enrichment_disease=DOID:305!6.30e-34!106;DOID:0050687!6.91e-23!143;DOID:299!9.42e-12!25;DOID:162!8.95e-11!235;DOID:14566!4.27e-10!239;DOID:1749!4.93e-10!14;DOID:7!9.24e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:299;4.29e-15;25!DOID:305;8.13e-13;106!DOID:3119;1.89e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.46e-27,106;DOID:0050687,1.03e-20,143;DOID:299,2.25e-15,25;DOID:162,5.72e-10,235;DOID:3119,1.28e-09,14;DOID:14566,1.60e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.31e-16!155;UBERON:0001555!6.31e-16!155;UBERON:0007026!6.31e-16!155;UBERON:0000466!4.75e-14!126;UBERON:0004921!1.10e-13!129;UBERON:0004185!1.10e-13!129;UBERON:0004119!1.51e-13!169;UBERON:0000925!1.51e-13!169;UBERON:0006595!1.51e-13!169;UBERON:0000464!1.28e-12!104;UBERON:0005911!5.06e-10!82;UBERON:0005177!6.97e-10!107;UBERON:0000077!6.88e-09!130;UBERON:0002553!1.08e-08!70;UBERON:0005409!2.04e-08!35;UBERON:0000160!8.80e-08!27;UBERON:0005153!1.55e-07!37;UBERON:0003135!1.67e-07!11;UBERON:0000058!1.69e-07!26;UBERON:0003886!1.75e-07!63;UBERON:0003101!2.76e-07!22;UBERON:0000079!2.76e-07!22;UBERON:0001041!5.00e-07!98;UBERON:0009569!7.15e-07!113;UBERON:0000473!9.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.26e-14;22!UBERON:0000160;6.92e-14;17!UBERON:0002108;3.84e-12;4!UBERON:0003135;6.78e-12;11!UBERON:0004921;9.98e-11;33!UBERON:0000473;6.65e-10;8!UBERON:0003101;2.34e-08;22!UBERON:0000079;2.34e-08;22!UBERON:0000058;1.26e-07;10!UBERON:0002114;1.66e-07;2!UBERON:0000922;2.62e-07;49!UBERON:0006947;3.86e-07;3!UBERON:0004054;3.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.25e-14,17;UBERON:0005409,1.43e-12,25;UBERON:0002108,4.19e-12,4;UBERON:0003135,1.12e-11,11;UBERON:0000473,9.59e-10,8;UBERON:0004921,1.54e-09,118;UBERON:0003101,3.03e-08,22;UBERON:0000079,3.03e-08,22;UBERON:0001007,6.93e-08,145;UBERON:0001555,6.93e-08,145;UBERON:0007026,6.93e-08,145;UBERON:0002114,1.81e-07,2;UBERON:0006947,4.32e-07,3;UBERON:0004054,4.32e-07,3 | |||
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| ||
|short_description=p5@EPCAM | |short_description=p5@EPCAM | ||
}} | }} |
Latest revision as of 12:15, 17 September 2015
Short description: | p5@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EPCAM_5end |
Coexpression cluster: | C1908_smallcell_endometrioid_small_colon_temporal_iPS_duodenum |
Association with transcript: | 151bp_to_ENST00000490733_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.10e-14 | 253 |
germ line cell | 1.16e-11 | 7 |
germ cell | 1.16e-11 | 7 |
embryonic stem cell | 4.54e-11 | 5 |
endodermal cell | 1.87e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.25e-14 | 17 |
gastrointestinal system | 1.43e-12 | 25 |
small intestine | 4.19e-12 | 4 |
male reproductive organ | 1.12e-11 | 11 |
testis | 9.59e-10 | 8 |
subdivision of digestive tract | 1.54e-09 | 118 |
male organism | 3.03e-08 | 22 |
male reproductive system | 3.03e-08 | 22 |
digestive system | 6.93e-08 | 145 |
digestive tract | 6.93e-08 | 145 |
primitive gut | 6.93e-08 | 145 |
duodenum | 1.81e-07 | 2 |
male genital duct | 4.32e-07 | 3 |
internal male genitalia | 4.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.46e-27 | 106 |
cell type cancer | 1.03e-20 | 143 |
adenocarcinoma | 2.25e-15 | 25 |
cancer | 5.72e-10 | 235 |
gastrointestinal system cancer | 1.28e-09 | 14 |
disease of cellular proliferation | 1.60e-09 | 239 |