FFCP PHASE1:Hg19::chr3:105085511..105085544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=214 | |EntrezGene=214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=400 | |HGNC=400 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTU0,Q13740,B3KNN9,Q6PEY4 | |UniProt=B4DTU0,Q13740,B3KNN9,Q6PEY4 | ||
|association_with_transcript=-12bp_to_NM_001243280,NM_001243281,NM_001243283,NM_001627_5end | |association_with_transcript=-12bp_to_NM_001243280,NM_001243281,NM_001243283,NM_001627_5end | ||
|cluster_id=chr3:105085511..105085544,+ | |||
|description=CAGE_peak_5_at_ALCAM_5end | |description=CAGE_peak_5_at_ALCAM_5end | ||
|id=chr3:105085511..105085544,+ | |id=chr3:105085511..105085544,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.66e-20!140;CL:0000988!2.58e-18!182;CL:0000037!3.41e-18!172;CL:0000566!3.41e-18!172;CL:0002032!5.45e-17!165;CL:0000837!5.45e-17!165;CL:0002087!2.94e-16!119;CL:0002031!9.72e-16!124;CL:0000945!1.42e-12!24;CL:0000826!1.42e-12!24;CL:0000542!7.64e-11!53;CL:0000051!7.64e-11!53;CL:0000838!2.59e-10!52;CL:0000236!4.92e-08!14;CL:0000766!5.47e-08!76;CL:0000557!6.67e-08!71;CL:0000763!1.29e-07!112;CL:0000049!1.29e-07!112;CL:0000134!3.31e-07!358;CL:0002320!8.62e-07!365 | |ontology_enrichment_celltype=CL:0000738!6.66e-20!140;CL:0000988!2.58e-18!182;CL:0000037!3.41e-18!172;CL:0000566!3.41e-18!172;CL:0002032!5.45e-17!165;CL:0000837!5.45e-17!165;CL:0002087!2.94e-16!119;CL:0002031!9.72e-16!124;CL:0000945!1.42e-12!24;CL:0000826!1.42e-12!24;CL:0000542!7.64e-11!53;CL:0000051!7.64e-11!53;CL:0000838!2.59e-10!52;CL:0000236!4.92e-08!14;CL:0000766!5.47e-08!76;CL:0000557!6.67e-08!71;CL:0000763!1.29e-07!112;CL:0000049!1.29e-07!112;CL:0000134!3.31e-07!358;CL:0002320!8.62e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.97e-15;24!CL:0000236;1.48e-09;13!CL:0000542;2.86e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.28e-23,136;CL:0000988,4.46e-23,177;CL:0000037,1.40e-22,168;CL:0002032,8.18e-21,161;CL:0000837,8.18e-21,161;CL:0002087,1.54e-18,115;CL:0002031,6.29e-18,120;CL:0000945,5.68e-15,24;CL:0000826,5.68e-15,24;CL:0000542,1.42e-12,53;CL:0000051,1.42e-12,53;CL:0000838,6.28e-12,52;CL:0000236,4.00e-10,14;CL:0000763,2.01e-09,108;CL:0000049,2.01e-09,108;CL:0000766,9.13e-09,72;CL:0000557,1.97e-08,67;CL:0002009,4.14e-07,61;CL:0000839,7.01e-07,66;CL:0000134,9.28e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;2.86e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.38e-10!102;UBERON:0003061!1.38e-10!102;UBERON:0002193!5.77e-09!112;UBERON:0002371!3.36e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.54e-11,98;UBERON:0003061,3.54e-11,98;UBERON:0002193,1.91e-09,108;UBERON:0002371,1.11e-07,76 | |||
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| ||
|short_description=p5@ALCAM | |short_description=p5@ALCAM | ||
}} | }} |
Latest revision as of 09:10, 19 September 2015
Short description: | p5@ALCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_NM_001243280, NM_001243281, NM_001243283, NM_001627_5end |
EntrezGene: | ALCAM |
HGNC: | 400 |
UniProt: | B4DTU0Q13740B3KNN9Q6PEY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.28e-23 | 136 |
hematopoietic cell | 4.46e-23 | 177 |
hematopoietic stem cell | 1.40e-22 | 168 |
hematopoietic oligopotent progenitor cell | 8.18e-21 | 161 |
hematopoietic multipotent progenitor cell | 8.18e-21 | 161 |
nongranular leukocyte | 1.54e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 6.29e-18 | 120 |
lymphocyte of B lineage | 5.68e-15 | 24 |
pro-B cell | 5.68e-15 | 24 |
lymphocyte | 1.42e-12 | 53 |
common lymphoid progenitor | 1.42e-12 | 53 |
lymphoid lineage restricted progenitor cell | 6.28e-12 | 52 |
B cell | 4.00e-10 | 14 |
myeloid cell | 2.01e-09 | 108 |
common myeloid progenitor | 2.01e-09 | 108 |
myeloid leukocyte | 9.13e-09 | 72 |
granulocyte monocyte progenitor cell | 1.97e-08 | 67 |
macrophage dendritic cell progenitor | 4.14e-07 | 61 |
myeloid lineage restricted progenitor cell | 7.01e-07 | 66 |
mesenchymal cell | 9.28e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.54e-11 | 98 |
blood island | 3.54e-11 | 98 |
hemolymphoid system | 1.91e-09 | 108 |
bone marrow | 1.11e-07 | 76 |