FFCP PHASE1:Hg19::chrX:7077952..7077959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=412 | |EntrezGene=412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11425 | |HGNC=11425 | ||
|TSSclassifier=strong | |||
|UniProt=Q0W975 | |UniProt=Q0W975 | ||
|association_with_transcript=198bp_to_AM282552_5end | |association_with_transcript=198bp_to_AM282552_5end | ||
|cluster_id=chrX:7077952..7077959,+ | |||
|coexpression_cluster_id=C674 | |||
|description=CAGE_peak_18_at_STS_5end | |description=CAGE_peak_18_at_STS_5end | ||
|id=chrX:7077952..7077959,+ | |id=chrX:7077952..7077959,+ | ||
|ontology_enrichment_celltype=CL:0000499!1.80e-08!27;CL:0002623!1.03e-07!3;CL:0000135!1.14e-07!3;CL:0000386!1.14e-07!3;CL:0000388!1.14e-07!3;CL:0002620!5.85e-07!23 | |ontology_enrichment_celltype=CL:0000499!1.80e-08!27;CL:0002623!1.03e-07!3;CL:0000135!1.14e-07!3;CL:0000386!1.14e-07!3;CL:0000388!1.14e-07!3;CL:0002620!5.85e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002149;6.48e-20;6!CL:0002255;6.48e-20;6!CL:0000138;9.49e-20;6!CL:0000499;1.16e-16;28!CL:0000153;1.58e-13;9!CL:0000447;1.58e-13;9!CL:0000327;1.65e-08;15!CL:0002327;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,5.35e-20,6;CL:0002255,5.35e-20,6;CL:0000058,1.15e-19,6;CL:0000138,1.15e-19,6;CL:0000499,1.16e-16,28;CL:0000153,1.80e-13,9;CL:0000447,1.80e-13,9;CL:0000327,1.78e-08,15;CL:0002327,2.43e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.37e-29;1!UBERON:0005795;4.27e-26;10 | |||
|ontology_enrichment_disease=DOID:0060084!4.44e-08!3;DOID:127!4.44e-08!3;DOID:305!3.74e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.49e-38;3!DOID:127;1.49e-38;3!DOID:0060072;3.16e-29;4!DOID:3001;6.48e-20;6!DOID:5093;2.26e-08;4!DOID:1612;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.23e-38,3;DOID:127,1.23e-38,3;DOID:0060072,2.74e-29,4;DOID:3001,5.35e-20,6;DOID:5093,2.43e-08,4;DOID:1612,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.06e-33!9;UBERON:0001557!5.54e-15!19;UBERON:0008947!3.40e-13!38;UBERON:0003258!3.40e-13!38;UBERON:0000072!1.55e-10!46;UBERON:0000065!7.13e-09!53;UBERON:0001004!1.11e-08!72;UBERON:0000043!1.14e-07!3;UBERON:0000063!7.88e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;4.04e-27;17!UBERON:0003975;1.19e-25;18!UBERON:0004175;4.41e-22;21!UBERON:0003134;1.02e-13;33!UBERON:0000474;8.47e-12;37!UBERON:0003100;1.06e-11;41!UBERON:0001911;2.26e-08;4!UBERON:0003133;2.41e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,3.74e-22,21;UBERON:0005795,3.56e-21,22;UBERON:0003975,3.56e-21,22;UBERON:0004175,1.04e-18,25;UBERON:0003100,1.21e-17,41;UBERON:0003134,7.98e-13,37;UBERON:0000474,7.98e-13,37;UBERON:0003133,5.35e-10,48;UBERON:0001911,2.43e-08,4;UBERON:0005333,2.43e-08,4;UBERON:0008425,2.43e-08,4;UBERON:0005311,2.43e-08,4;UBERON:0005156,3.24e-08,59;UBERON:0000990,3.24e-08,59 | |||
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|short_description=p18@STS | |short_description=p18@STS | ||
}} | }} |
Latest revision as of 07:33, 16 September 2015
Short description: | p18@STS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_STS_5end |
Coexpression cluster: | C674_endometrial_cord_ductal_synovial_adrenal_B_mixed |
Association with transcript: | 198bp_to_AM282552_5end |
EntrezGene: | STS |
HGNC: | 11425 |
UniProt: | Q0W975 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 5.35e-20 | 6 |
stromal cell of endometrium | 5.35e-20 | 6 |
chondroblast | 1.15e-19 | 6 |
chondrocyte | 1.15e-19 | 6 |
stromal cell | 1.16e-16 | 28 |
GAG secreting cell | 1.80e-13 | 9 |
carbohydrate secreting cell | 1.80e-13 | 9 |
extracellular matrix secreting cell | 1.78e-08 | 15 |
mammary gland epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
uterus | 3.74e-22 | 21 |
embryonic uterus | 3.56e-21 | 22 |
internal female genitalia | 3.56e-21 | 22 |
internal genitalia | 1.04e-18 | 25 |
female organism | 1.21e-17 | 41 |
female reproductive organ | 7.98e-13 | 37 |
female reproductive system | 7.98e-13 | 37 |
reproductive organ | 5.35e-10 | 48 |
mammary gland | 2.43e-08 | 4 |
mammary bud | 2.43e-08 | 4 |
mammary ridge | 2.43e-08 | 4 |
mammary placode | 2.43e-08 | 4 |
reproductive structure | 3.24e-08 | 59 |
reproductive system | 3.24e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.23e-38 | 3 |
leiomyoma | 1.23e-38 | 3 |
benign neoplasm | 2.74e-29 | 4 |
female reproductive endometrioid cancer | 5.35e-20 | 6 |
thoracic cancer | 2.43e-08 | 4 |
breast cancer | 2.43e-08 | 4 |