FFCP PHASE1:Hg19::chr3:161460708..161460712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:161460708..161460712,+ | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr3:161460708..161460712,+ | |description=CAGE_peak_at_chr3:161460708..161460712,+ | ||
|id=chr3:161460708..161460712,+ | |id=chr3:161460708..161460712,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.64e-13;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;3.42e-11;4!DOID:1612;3.42e-11;4!DOID:7;2.08e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.79e-11,4;DOID:1612,3.79e-11,4;DOID:7,6.46e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.37e-23!20;UBERON:0002619!2.38e-21!22;UBERON:0001869!3.94e-20!32;UBERON:0002020!6.72e-19!34;UBERON:0003528!6.72e-19!34;UBERON:0001893!8.00e-19!34;UBERON:0000956!1.23e-18!25;UBERON:0000203!1.23e-18!25;UBERON:0000200!3.39e-18!6;UBERON:0002791!1.48e-16!33;UBERON:0002780!3.15e-15!41;UBERON:0001890!3.15e-15!41;UBERON:0006240!3.15e-15!41;UBERON:0001017!4.88e-15!82;UBERON:0003080!8.23e-15!42;UBERON:0005743!3.69e-14!86;UBERON:0002771!6.32e-14!3;UBERON:0000073!1.89e-12!94;UBERON:0001016!1.89e-12!94;UBERON:0001049!4.63e-12!57;UBERON:0005068!4.63e-12!57;UBERON:0006241!4.63e-12!57;UBERON:0007135!4.63e-12!57;UBERON:0002616!1.46e-11!59;UBERON:0000955!8.08e-11!69;UBERON:0006238!8.08e-11!69;UBERON:0003056!1.87e-09!61;UBERON:0002021!4.96e-09!5;UBERON:0002346!4.97e-09!90;UBERON:0001872!1.38e-08!5;UBERON:0007023!1.51e-08!115;UBERON:0001737!2.39e-08!9;UBERON:0003075!2.60e-08!86;UBERON:0007284!2.60e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0002423;2.50e-07;25!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,3.27e-08,22;UBERON:0003894,3.27e-08,22;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0009854,6.75e-08,23;UBERON:0007499,2.43e-07,25;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25;UBERON:0009856,4.28e-07,26 | |||
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|short_description=p@chr3:161460708..161460712,+ | |short_description=p@chr3:161460708..161460712,+ | ||
}} | }} |
Latest revision as of 17:50, 29 July 2015
Short description: | p@chr3:161460708..161460712, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:161460708..161460712, + |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 3.27e-08 | 22 |
liver primordium | 3.27e-08 | 22 |
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
digestive tract diverticulum | 6.75e-08 | 23 |
epithelial sac | 2.43e-07 | 25 |
epithelium of foregut-midgut junction | 2.43e-07 | 25 |
anatomical boundary | 2.43e-07 | 25 |
hepatobiliary system | 2.43e-07 | 25 |
foregut-midgut junction | 2.43e-07 | 25 |
septum transversum | 2.43e-07 | 25 |
sac | 4.28e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.79e-11 | 4 |
breast cancer | 3.79e-11 | 4 |
disease of anatomical entity | 6.46e-10 | 39 |