FFCP PHASE1:Hg19::chr3:58196939..58196956,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1776 | |EntrezGene=1776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2959 | |HGNC=2959 | ||
|TSSclassifier=strong | |||
|UniProt=Q13609,C9J9N0 | |UniProt=Q13609,C9J9N0 | ||
|association_with_transcript=0bp_to_ENST00000394549,ENST00000461914_5end | |association_with_transcript=0bp_to_ENST00000394549,ENST00000461914_5end | ||
|cluster_id=chr3:58196939..58196956,- | |||
|coexpression_cluster_id=C1157 | |||
|description=CAGE_peak_7_at_DNASE1L3_5end | |description=CAGE_peak_7_at_DNASE1L3_5end | ||
|id=chr3:58196939..58196956,- | |id=chr3:58196939..58196956,- | ||
|ontology_enrichment_celltype=CL:0002583!1.19e-08!2;CL:0002617!2.20e-08!2 | |ontology_enrichment_celltype=CL:0002583!1.19e-08!2;CL:0002617!2.20e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002262;1.20e-08;2!CL:1000398;1.20e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.20e-08,2;CL:1000398,1.20e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.54e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-13!115;UBERON:0002106!1.66e-12!3;UBERON:0004854!1.66e-12!3;UBERON:0009034!1.66e-12!3;UBERON:0002095!1.66e-12!3;UBERON:0004782!1.66e-12!3;UBERON:0003281!1.66e-12!3;UBERON:0009664!1.66e-12!3;UBERON:0002296!1.66e-12!3;UBERON:0005602!1.66e-12!3;UBERON:0001179!1.66e-12!3;UBERON:0006293!1.66e-12!3;UBERON:0002417!2.18e-08!61;UBERON:0000916!2.18e-08!61;UBERON:0005172!4.20e-08!55;UBERON:0005173!4.20e-08!55;UBERON:0009569!3.26e-07!113;UBERON:0005057!7.27e-07!26 | |ontology_enrichment_uberon=UBERON:0007023!1.17e-13!115;UBERON:0002106!1.66e-12!3;UBERON:0004854!1.66e-12!3;UBERON:0009034!1.66e-12!3;UBERON:0002095!1.66e-12!3;UBERON:0004782!1.66e-12!3;UBERON:0003281!1.66e-12!3;UBERON:0009664!1.66e-12!3;UBERON:0002296!1.66e-12!3;UBERON:0005602!1.66e-12!3;UBERON:0001179!1.66e-12!3;UBERON:0006293!1.66e-12!3;UBERON:0002417!2.18e-08!61;UBERON:0000916!2.18e-08!61;UBERON:0005172!4.20e-08!55;UBERON:0005173!4.20e-08!55;UBERON:0009569!3.26e-07!113;UBERON:0005057!7.27e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-12;19!UBERON:0006925;1.91e-12;19!UBERON:0002423;1.60e-09;25!UBERON:0002368;3.18e-09;33!UBERON:0001281;1.20e-08;2!UBERON:0003497;1.20e-08;2!UBERON:0003909;1.20e-08;2!UBERON:0003835;1.20e-08;2!UBERON:0001905;2.67e-08;2!UBERON:0002757;2.67e-08;2!UBERON:0010134;2.67e-08;2!UBERON:0005408;2.67e-08;2!UBERON:0001899;2.67e-08;2!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-12,19;UBERON:0006925,1.88e-12,19;UBERON:0008836,1.88e-12,19;UBERON:0008835,8.61e-11,22;UBERON:0003894,8.61e-11,22;UBERON:0009854,2.47e-10,23;UBERON:0002368,3.19e-10,35;UBERON:0007499,1.59e-09,25;UBERON:0009497,1.59e-09,25;UBERON:0000015,1.59e-09,25;UBERON:0002423,1.59e-09,25;UBERON:0006235,1.59e-09,25;UBERON:0004161,1.59e-09,25;UBERON:0005172,2.63e-09,54;UBERON:0005173,2.63e-09,54;UBERON:0009856,3.61e-09,26;UBERON:0001281,1.20e-08,2;UBERON:0003497,1.20e-08,2;UBERON:0003909,1.20e-08,2;UBERON:0003835,1.20e-08,2;UBERON:0002417,2.41e-08,60;UBERON:0000916,2.41e-08,60;UBERON:0001905,3.08e-08,2;UBERON:0002757,3.08e-08,2;UBERON:0010134,3.08e-08,2;UBERON:0005408,3.08e-08,2;UBERON:0001899,3.08e-08,2;UBERON:0000949,6.13e-08,45;UBERON:0002365,1.01e-07,31;UBERON:0002330,1.01e-07,31 | |||
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| ||
|short_description=p7@DNASE1L3 | |short_description=p7@DNASE1L3 | ||
}} | }} |
Latest revision as of 05:13, 19 September 2015
Short description: | p7@DNASE1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DNASE1L3_5end |
Coexpression cluster: | C1157_Hepatic_neuroectodermal_liver_Hepatocyte_Adipocyte_spleen_kidney |
Association with transcript: | 0bp_to_ENST00000394549, ENST00000461914_5end |
EntrezGene: | DNASE1L3 |
HGNC: | 2959 |
UniProt: | Q13609C9J9N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.20e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.20e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-12 | 19 |
digestive gland | 1.88e-12 | 19 |
liver bud | 1.88e-12 | 19 |
hepatic diverticulum | 8.61e-11 | 22 |
liver primordium | 8.61e-11 | 22 |
digestive tract diverticulum | 2.47e-10 | 23 |
endocrine gland | 3.19e-10 | 35 |
epithelial sac | 1.59e-09 | 25 |
epithelium of foregut-midgut junction | 1.59e-09 | 25 |
anatomical boundary | 1.59e-09 | 25 |
hepatobiliary system | 1.59e-09 | 25 |
foregut-midgut junction | 1.59e-09 | 25 |
septum transversum | 1.59e-09 | 25 |
abdomen element | 2.63e-09 | 54 |
abdominal segment element | 2.63e-09 | 54 |
sac | 3.61e-09 | 26 |
hepatic sinusoid | 1.20e-08 | 2 |
abdomen blood vessel | 1.20e-08 | 2 |
sinusoid | 1.20e-08 | 2 |
abdominal segment blood vessel | 1.20e-08 | 2 |
abdominal segment of trunk | 2.41e-08 | 60 |
abdomen | 2.41e-08 | 60 |
pineal body | 3.08e-08 | 2 |
regional part of epithalamus | 3.08e-08 | 2 |
secretory circumventricular organ | 3.08e-08 | 2 |
circumventricular organ | 3.08e-08 | 2 |
epithalamus | 3.08e-08 | 2 |
endocrine system | 6.13e-08 | 45 |
exocrine gland | 1.01e-07 | 31 |
exocrine system | 1.01e-07 | 31 |