FFCP PHASE1:Hg19::chr4:169433223..169433234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:169433223..169433234,+ | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_at_chr4:169433223..169433234,+ | |description=CAGE_peak_at_chr4:169433223..169433234,+ | ||
|id=chr4:169433223..169433234,+ | |id=chr4:169433223..169433234,+ | ||
|ontology_enrichment_celltype=CL:0002253!2.02e-11!2 | |ontology_enrichment_celltype=CL:0002253!2.02e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.56e-26;2!CL:0002563;1.00e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.56e-26,2;CL:0002563,1.00e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.33e-21!4;UBERON:0005058!6.33e-21!4;UBERON:0009113!6.33e-21!4;UBERON:0003295!6.33e-21!4;UBERON:0005562!6.33e-21!4;UBERON:0003351!2.66e-14!6;UBERON:0004177!2.12e-12!7;UBERON:0000974!5.80e-09!10;UBERON:0003408!5.80e-09!10;UBERON:0001042!5.80e-09!10;UBERON:0009145!5.80e-09!10;UBERON:0006562!3.14e-08!11;UBERON:0009722!3.14e-08!11;UBERON:0007690!3.14e-08!11 | |ontology_enrichment_uberon=UBERON:0002370!6.33e-21!4;UBERON:0005058!6.33e-21!4;UBERON:0009113!6.33e-21!4;UBERON:0003295!6.33e-21!4;UBERON:0005562!6.33e-21!4;UBERON:0003351!2.66e-14!6;UBERON:0004177!2.12e-12!7;UBERON:0000974!5.80e-09!10;UBERON:0003408!5.80e-09!10;UBERON:0001042!5.80e-09!10;UBERON:0009145!5.80e-09!10;UBERON:0006562!3.14e-08!11;UBERON:0009722!3.14e-08!11;UBERON:0007690!3.14e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.10e-26;2!UBERON:0005058;8.10e-26;2!UBERON:0009113;8.10e-26;2!UBERON:0001052;1.00e-13;4!UBERON:0001242;1.00e-13;4!UBERON:0001262;1.00e-13;4!UBERON:0004786;1.00e-13;4!UBERON:0004808;1.00e-13;4!UBERON:0001277;1.00e-13;4!UBERON:0004907;2.94e-11;5!UBERON:0004177;3.42e-11;5!UBERON:0005057;3.42e-11;5!UBERON:0000485;2.03e-08;7!UBERON:0003929;2.03e-08;7!UBERON:0003350;1.59e-07;8!UBERON:0001155;7.91e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.00e-13,4;UBERON:0001242,1.00e-13,4;UBERON:0001262,1.00e-13,4;UBERON:0004786,1.00e-13,4;UBERON:0004808,1.00e-13,4;UBERON:0001277,1.00e-13,4;UBERON:0002370,1.13e-13,4;UBERON:0005058,1.13e-13,4;UBERON:0009113,1.13e-13,4;UBERON:0003295,1.13e-13,4;UBERON:0005562,1.13e-13,4;UBERON:0004907,2.94e-11,5;UBERON:0003351,1.44e-09,6;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7;UBERON:0003350,1.59e-07,8;UBERON:0001155,7.91e-07,9;UBERON:0000485,7.91e-07,9 | |||
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|short_description=p@chr4:169433223..169433234,+ | |short_description=p@chr4:169433223..169433234,+ | ||
}} | }} |
Latest revision as of 03:12, 30 July 2015
Short description: | p@chr4:169433223..169433234, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:169433223..169433234, + |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.56e-26 | 2 |
intestinal epithelial cell | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.00e-13 | 4 |
intestinal mucosa | 1.00e-13 | 4 |
wall of intestine | 1.00e-13 | 4 |
gastrointestinal system mucosa | 1.00e-13 | 4 |
gastrointestinal system epithelium | 1.00e-13 | 4 |
intestinal epithelium | 1.00e-13 | 4 |
thymus | 1.13e-13 | 4 |
hemolymphoid system gland | 1.13e-13 | 4 |
thymic region | 1.13e-13 | 4 |
pharyngeal gland | 1.13e-13 | 4 |
thymus primordium | 1.13e-13 | 4 |
lower digestive tract | 2.94e-11 | 5 |
pharyngeal epithelium | 1.44e-09 | 6 |
hemopoietic organ | 2.18e-08 | 7 |
immune organ | 2.18e-08 | 7 |
epithelium of mucosa | 1.59e-07 | 8 |
colon | 7.91e-07 | 9 |
simple columnar epithelium | 7.91e-07 | 9 |