FFCP PHASE1:Hg19::chr4:53417811..53417814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:53417811..53417814,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr4:53417811..53417814,- | |description=CAGE_peak_at_chr4:53417811..53417814,- | ||
|id=chr4:53417811..53417814,- | |id=chr4:53417811..53417814,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.55e-98;1!UBERON:0004140;1.55e-98;1!UBERON:0004872;1.78e-15;7 | |||
|ontology_enrichment_disease=DOID:114!7.73e-66!2;DOID:178!9.85e-34!1;DOID:326!9.85e-34!1;DOID:3978!9.85e-34!1;DOID:3394!9.85e-34!1;DOID:5844!9.85e-34!1;DOID:1287!1.38e-33!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.38e-44!27;UBERON:0002084!2.58e-34!1;UBERON:0002082!2.58e-34!1;UBERON:0004706!2.58e-34!1;UBERON:0002146!3.61e-34!1;UBERON:0005623!3.61e-34!1;UBERON:0003103!1.27e-17!69;UBERON:0000948!3.20e-13!24;UBERON:0005498!3.20e-13!24;UBERON:0004140!3.20e-13!24;UBERON:0009881!3.20e-13!24;UBERON:0004141!3.20e-13!24;UBERON:0003084!3.20e-13!24;UBERON:0007005!3.20e-13!24;UBERON:0004139!3.20e-13!24;UBERON:0004291!3.20e-13!24;UBERON:0004151!2.07e-12!3;UBERON:0002300!2.07e-12!3;UBERON:0003978!2.31e-12!3;UBERON:0009751!2.31e-12!3;UBERON:0000946!2.31e-12!3;UBERON:0002523!2.31e-12!3;UBERON:0005983!2.31e-12!3;UBERON:0002165!2.31e-12!3;UBERON:0002062!2.31e-12!3;UBERON:0007280!2.31e-12!3;UBERON:0001009!6.14e-11!113;UBERON:0007023!1.34e-07!115 | |ontology_enrichment_uberon=UBERON:0007100!4.38e-44!27;UBERON:0002084!2.58e-34!1;UBERON:0002082!2.58e-34!1;UBERON:0004706!2.58e-34!1;UBERON:0002146!3.61e-34!1;UBERON:0005623!3.61e-34!1;UBERON:0003103!1.27e-17!69;UBERON:0000948!3.20e-13!24;UBERON:0005498!3.20e-13!24;UBERON:0004140!3.20e-13!24;UBERON:0009881!3.20e-13!24;UBERON:0004141!3.20e-13!24;UBERON:0003084!3.20e-13!24;UBERON:0007005!3.20e-13!24;UBERON:0004139!3.20e-13!24;UBERON:0004291!3.20e-13!24;UBERON:0004151!2.07e-12!3;UBERON:0002300!2.07e-12!3;UBERON:0003978!2.31e-12!3;UBERON:0009751!2.31e-12!3;UBERON:0000946!2.31e-12!3;UBERON:0002523!2.31e-12!3;UBERON:0005983!2.31e-12!3;UBERON:0002165!2.31e-12!3;UBERON:0002062!2.31e-12!3;UBERON:0007280!2.31e-12!3;UBERON:0001009!6.14e-11!113;UBERON:0007023!1.34e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.55e-98;1!UBERON:0002082;1.55e-98;1!UBERON:0004151;5.04e-34;3!UBERON:0000948;3.41e-19;22!UBERON:0007100;4.64e-17;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.55e-98,1;UBERON:0002082,2.55e-98,1;UBERON:0010226,2.55e-98,1;UBERON:0004151,5.96e-34,3;UBERON:0000948,1.03e-17,24;UBERON:0005498,1.03e-17,24;UBERON:0004140,1.03e-17,24;UBERON:0009881,1.03e-17,24;UBERON:0004141,1.03e-17,24;UBERON:0003084,1.03e-17,24;UBERON:0007005,1.03e-17,24;UBERON:0004139,1.03e-17,24;UBERON:0004291,1.03e-17,24;UBERON:0007100,6.71e-16,27;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p@chr4:53417811..53417814,- | |short_description=p@chr4:53417811..53417814,- | ||
}} | }} |
Latest revision as of 05:36, 30 July 2015
Short description: | p@chr4:53417811..53417814, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:53417811..53417814, - |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.55e-98 | 1 |
cardiac ventricle | 2.55e-98 | 1 |
future cardiac ventricle | 2.55e-98 | 1 |
cardiac chamber | 5.96e-34 | 3 |
heart | 1.03e-17 | 24 |
primitive heart tube | 1.03e-17 | 24 |
primary heart field | 1.03e-17 | 24 |
anterior lateral plate mesoderm | 1.03e-17 | 24 |
heart tube | 1.03e-17 | 24 |
heart primordium | 1.03e-17 | 24 |
cardiac mesoderm | 1.03e-17 | 24 |
cardiogenic plate | 1.03e-17 | 24 |
heart rudiment | 1.03e-17 | 24 |
primary circulatory organ | 6.71e-16 | 27 |
compound organ | 4.47e-07 | 68 |