FFCP PHASE1:Hg19::chr5:158140039..158140051,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1879 | |EntrezGene=1879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3126 | |HGNC=3126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_BC019927_5end | |association_with_transcript=-13bp_to_BC019927_5end | ||
|cluster_id=chr5:158140039..158140051,- | |||
|description=CAGE_peak_12_at_EBF1_5end | |description=CAGE_peak_12_at_EBF1_5end | ||
|id=chr5:158140039..158140051,- | |id=chr5:158140039..158140051,- | ||
|ontology_enrichment_celltype=CL:0000057!4.43e-12!75;CL:0000945!6.63e-08!24;CL:0000826!6.63e-08!24;CL:0000136!1.74e-07!15;CL:0002620!5.64e-07!23 | |ontology_enrichment_celltype=CL:0000057!4.43e-12!75;CL:0000945!6.63e-08!24;CL:0000826!6.63e-08!24;CL:0000136!1.74e-07!15;CL:0002620!5.64e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000135;8.18e-24;3!CL:0000388;8.18e-24;3!CL:0000153;3.34e-21;9!CL:0000447;3.34e-21;9!CL:0000499;1.65e-16;28!CL:0000327;1.12e-12;15!CL:0000138;5.46e-12;6!CL:0002564;2.14e-11;3!CL:0000214;2.14e-11;3!CL:0000817;2.12e-09;1!CL:0000785;5.97e-09;1!CL:0000819;5.97e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,6.26e-24,3;CL:0000388,6.26e-24,3;CL:0000153,5.01e-21,9;CL:0000447,5.01e-21,9;CL:0000499,1.88e-16,28;CL:0000327,1.42e-12,15;CL:0000058,8.77e-12,6;CL:0000138,8.77e-12,6;CL:0000214,1.84e-11,3;CL:0000817,2.64e-11,3;CL:0002564,2.78e-11,3;CL:0000819,7.27e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.97e-09;1!DOID:8675;5.97e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.27e-09,1;DOID:8675,7.27e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.94e-08!45;UBERON:0002416!2.94e-08!45;UBERON:0002097!3.75e-07!40 | |ontology_enrichment_uberon=UBERON:0002199!2.94e-08!45;UBERON:0002416!2.94e-08!45;UBERON:0002097!3.75e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.18e-24;3!UBERON:0000043;8.18e-24;3!UBERON:0007845;8.18e-24;3!UBERON:0004905;7.45e-16;8!UBERON:0000982;7.45e-16;8!UBERON:0004770;7.45e-16;8!UBERON:0006915;2.14e-11;3!UBERON:0007616;2.14e-11;3!UBERON:0002217;2.14e-11;3!UBERON:0002018;2.14e-11;3!UBERON:0002242;2.14e-11;3!UBERON:0007195;5.97e-09;1!UBERON:0004457;1.91e-08;9!UBERON:0000042;1.91e-08;9!UBERON:0011135;3.57e-07;5!UBERON:0002216;3.57e-07;5!UBERON:0011134;3.57e-07;5!UBERON:0002209;3.57e-07;5!UBERON:0002213;3.57e-07;5!UBERON:0007844;3.57e-07;5!UBERON:0011138;3.57e-07;5!UBERON:0001130;3.57e-07;5!UBERON:0001066;3.57e-07;5!UBERON:0001468;3.57e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.26e-24,3;UBERON:0000043,6.26e-24,3;UBERON:0007845,6.26e-24,3;UBERON:0004905,8.07e-16,8;UBERON:0000982,8.07e-16,8;UBERON:0004770,8.07e-16,8;UBERON:0006915,1.84e-11,3;UBERON:0007616,1.84e-11,3;UBERON:0002217,1.84e-11,3;UBERON:0002018,1.84e-11,3;UBERON:0002242,2.78e-11,3;UBERON:0003068,2.78e-11,3;UBERON:0002328,2.78e-11,3;UBERON:0004880,2.78e-11,3;UBERON:0007195,7.85e-09,1;UBERON:0011135,4.16e-07,5;UBERON:0002216,4.16e-07,5;UBERON:0011134,4.16e-07,5;UBERON:0002209,4.16e-07,5;UBERON:0002213,4.16e-07,5;UBERON:0005856,4.16e-07,5;UBERON:0005866,4.16e-07,5;UBERON:0005863,4.16e-07,5;UBERON:0007844,4.16e-07,5;UBERON:0011138,4.16e-07,5;UBERON:0001130,4.16e-07,5;UBERON:0001066,4.16e-07,5;UBERON:0001468,4.16e-07,5 | |||
|phase1_expression=0.726713517082227,1.92690471501885,0.422863212287913,2.00146596706261,0,0,0,0,1.56711376919903,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0.840547463227464,0.492603536699674,0.787107813136792,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,1.00267582127178,1.30361867064741,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0,0,1.72852777344,0,0.312160076830321,0,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0.245668634623536,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0.412210116953756,0.515281080091258,0.37223371266318,0.168776332241266,0.487185025805993,0.504867548488229,0.276149695926898,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,2.29723871668228,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,1.00034104211935,0.271265023699736,0,0,0,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.587403472388222,0,0,0.431428401637234,0,0,0,0.30239029332968,0.744323423456331,0.306923946576125,0.841980283299221,0.384417447767103,0.511707249066704,0.160853921143607,0,0.616838775210622,0.532685175939381,0,0,0.348631135379878,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,1.47775344708365,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,2.16403819464667,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0.251932747854276,0,0.492339221844278,0.311039587661807,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0.583209226766509,1.38899995946634,0,0.120596438625408,1.52581736317083,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0.802577647298789,0,1.27718352450966,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0,0,0,0.19980960958213,0,0,0.343189995723929,0,0,0,0,0,0.305994652908965,0,0,0.136905378891993,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0.196854963029498,0.338693328263138,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.974340787047167,0,0.544017803369474,0.2506898940227,0.919036730290385,0.983617892129413,0,0,0.122026264901963,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0.285465333544967,0,2.81000943484129,0.434763085832475,0.298509605773748,0.467426619694449,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0.466311601748341,0,0,0.449803112163605,0,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0.363697318405119,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0.552317850755522,0,0,0.511577485214607,0.107824811396682,0,0.436838552768056,0,0.637724760305049,0,0,0,2.12926711503384,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.460935950223117,0,0.135939465953663,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.971421986118279,0,0,0,0,0.109940516745429,0,0.308696632431779,0.655678681511872,0,0.980593287015622,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.499705779624645,0,0,0,0,0,0,0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|phase1_expression=0.726713517082227,1.92690471501885,0.422863212287913,2.00146596706261,0,0,0,0,1.56711376919903,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0.840547463227464,0.492603536699674,0.787107813136792,0,0,0,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,1.00267582127178,1.30361867064741,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0,0,1.72852777344,0,0.312160076830321,0,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0.245668634623536,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0.412210116953756,0.515281080091258,0.37223371266318,0.168776332241266,0.487185025805993,0.504867548488229,0.276149695926898,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,2.29723871668228,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,1.00034104211935,0.271265023699736,0,0,0,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.587403472388222,0,0,0.431428401637234,0,0,0,0.30239029332968,0.744323423456331,0.306923946576125,0.841980283299221,0.384417447767103,0.511707249066704,0.160853921143607,0,0.616838775210622,0.532685175939381,0,0,0.348631135379878,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,1.47775344708365,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,2.16403819464667,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0.251932747854276,0,0.492339221844278,0.311039587661807,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0.583209226766509,1.38899995946634,0,0.120596438625408,1.52581736317083,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0.802577647298789,0,1.27718352450966,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0,0,0,0.19980960958213,0,0,0.343189995723929,0,0,0,0,0,0.305994652908965,0,0,0.136905378891993,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0.196854963029498,0.338693328263138,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.974340787047167,0,0.544017803369474,0.2506898940227,0.919036730290385,0.983617892129413,0,0,0.122026264901963,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0.285465333544967,0,2.81000943484129,0.434763085832475,0.298509605773748,0.467426619694449,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0.466311601748341,0,0,0.449803112163605,0,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0.363697318405119,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0.552317850755522,0,0,0.511577485214607,0.107824811396682,0,0.436838552768056,0,0.637724760305049,0,0,0,2.12926711503384,0,0,0,0,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.460935950223117,0,0.135939465953663,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.971421986118279,0,0,0,0,0.109940516745429,0,0.308696632431779,0.655678681511872,0,0.980593287015622,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.499705779624645,0,0,0,0,0,0,0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| ||
|short_description=p12@EBF1 | |short_description=p12@EBF1 | ||
}} | }} |
Latest revision as of 14:47, 16 September 2015
Short description: | p12@EBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_EBF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_BC019927_5end |
EntrezGene: | EBF1 |
HGNC: | 3126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 6.26e-24 | 3 |
tendon cell | 6.26e-24 | 3 |
GAG secreting cell | 5.01e-21 | 9 |
carbohydrate secreting cell | 5.01e-21 | 9 |
stromal cell | 1.88e-16 | 28 |
extracellular matrix secreting cell | 1.42e-12 | 15 |
chondroblast | 8.77e-12 | 6 |
chondrocyte | 8.77e-12 | 6 |
synovial cell | 1.84e-11 | 3 |
precursor B cell | 2.64e-11 | 3 |
nucleus pulposus cell of intervertebral disc | 2.78e-11 | 3 |
B-1 B cell | 7.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.26e-24 | 3 |
tendon | 6.26e-24 | 3 |
regular connective tissue | 6.26e-24 | 3 |
articulation | 8.07e-16 | 8 |
skeletal joint | 8.07e-16 | 8 |
articular system | 8.07e-16 | 8 |
stratified squamous epithelium | 1.84e-11 | 3 |
layer of synovial tissue | 1.84e-11 | 3 |
synovial joint | 1.84e-11 | 3 |
synovial membrane of synovial joint | 1.84e-11 | 3 |
nucleus pulposus | 2.78e-11 | 3 |
axial mesoderm | 2.78e-11 | 3 |
notochord | 2.78e-11 | 3 |
chordamesoderm | 2.78e-11 | 3 |
stroma of bone marrow | 7.85e-09 | 1 |
intervertebral cartilage | 4.16e-07 | 5 |
symphysis | 4.16e-07 | 5 |
nonsynovial joint | 4.16e-07 | 5 |
fibrous joint | 4.16e-07 | 5 |
cartilaginous joint | 4.16e-07 | 5 |
developing mesenchymal condensation | 4.16e-07 | 5 |
pre-cartilage condensation | 4.16e-07 | 5 |
cartilaginous condensation | 4.16e-07 | 5 |
cartilage element | 4.16e-07 | 5 |
post-cranial axial skeletal system | 4.16e-07 | 5 |
vertebral column | 4.16e-07 | 5 |
intervertebral disk | 4.16e-07 | 5 |
intervertebral joint | 4.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.27e-09 | 1 |
lymphosarcoma | 7.27e-09 | 1 |