FFCP PHASE1:Hg19::chr5:158181032..158181062,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:158181032..158181062,- | |||
|description=CAGE_peak_at_chr5:158181032..158181062,- | |description=CAGE_peak_at_chr5:158181032..158181062,- | ||
|id=chr5:158181032..158181062,- | |id=chr5:158181032..158181062,- | ||
|ontology_enrichment_celltype=CL:0000057!3.95e-25!75;CL:0002620!2.78e-16!23;CL:0000055!2.25e-14!180;CL:0000134!5.30e-13!358;CL:0000136!2.32e-12!15;CL:0002320!2.99e-12!365;CL:0000048!4.30e-12!430;CL:0000723!1.57e-11!436;CL:0002570!3.01e-11!8;CL:0000219!4.96e-11!390;CL:0002334!5.56e-11!12;CL:0000034!8.30e-11!444;CL:0002556!2.36e-07!6;CL:0000499!6.32e-07!27 | |ontology_enrichment_celltype=CL:0000057!3.95e-25!75;CL:0002620!2.78e-16!23;CL:0000055!2.25e-14!180;CL:0000134!5.30e-13!358;CL:0000136!2.32e-12!15;CL:0002320!2.99e-12!365;CL:0000048!4.30e-12!430;CL:0000723!1.57e-11!436;CL:0002570!3.01e-11!8;CL:0000219!4.96e-11!390;CL:0002334!5.56e-11!12;CL:0000034!8.30e-11!444;CL:0002556!2.36e-07!6;CL:0000499!6.32e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.44e-19;23!CL:0002334;5.50e-18;12!CL:0000136;1.61e-13;13!CL:0002570;6.09e-13;8!CL:0002615;5.54e-10;3!CL:0002579;2.00e-09;3!CL:0002580;2.84e-09;3!CL:0000153;1.38e-08;9!CL:0000447;1.38e-08;9!CL:0002561;9.35e-08;2!CL:0000057;1.23e-07;73!CL:0002617;3.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.30e-24,76;CL:0002620,7.25e-19,23;CL:0000136,6.32e-18,15;CL:0002334,8.35e-18,12;CL:0000134,2.30e-13,354;CL:0002570,5.60e-13,8;CL:0002320,7.45e-13,361;CL:0000219,4.63e-11,386;CL:0002615,3.80e-10,3;CL:0000048,1.73e-09,427;CL:0002580,2.81e-09,3;CL:0002579,2.81e-09,3;CL:0000723,3.54e-09,433;CL:0000034,8.91e-09,441;CL:0000153,1.38e-08,9;CL:0000447,1.38e-08,9;CL:0002561,9.22e-08,2;CL:0002617,3.55e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.38e-08!5;DOID:450!3.38e-08!5;DOID:66!3.38e-08!5;DOID:423!3.38e-08!5;DOID:0080000!3.38e-08!5;DOID:11722!3.38e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.59e-15;5!DOID:450;4.59e-15;5!DOID:66;4.59e-15;5!DOID:423;4.59e-15;5!DOID:0080000;4.59e-15;5!DOID:11722;4.59e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.86e-15,5;DOID:450,3.86e-15,5;DOID:66,3.86e-15,5;DOID:423,3.86e-15,5;DOID:0080000,3.86e-15,5;DOID:11722,3.86e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!8.06e-14!375;UBERON:0002199!1.21e-13!45;UBERON:0002416!1.21e-13!45;UBERON:0001013!3.76e-13!14;UBERON:0003102!3.17e-12!95;UBERON:0002097!1.11e-10!40;UBERON:0003688!1.88e-09!6;UBERON:0002358!1.88e-09!6;UBERON:0003684!1.88e-09!6;UBERON:0001178!1.88e-09!6;UBERON:0004457!1.88e-07!12;UBERON:0000042!1.88e-07!12;UBERON:0001758!2.36e-07!6;UBERON:0003672!2.36e-07!6 | |ontology_enrichment_uberon=UBERON:0002384!8.06e-14!375;UBERON:0002199!1.21e-13!45;UBERON:0002416!1.21e-13!45;UBERON:0001013!3.76e-13!14;UBERON:0003102!3.17e-12!95;UBERON:0002097!1.11e-10!40;UBERON:0003688!1.88e-09!6;UBERON:0002358!1.88e-09!6;UBERON:0003684!1.88e-09!6;UBERON:0001178!1.88e-09!6;UBERON:0004457!1.88e-07!12;UBERON:0000042!1.88e-07!12;UBERON:0001758!2.36e-07!6;UBERON:0003672!2.36e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.26e-20;9!UBERON:0000042;1.26e-20;9!UBERON:0003688;1.08e-17;6!UBERON:0002358;1.08e-17;6!UBERON:0003684;1.08e-17;6!UBERON:0001178;1.08e-17;6!UBERON:0001013;2.28e-15;14!UBERON:0002199;3.69e-14;46!UBERON:0002416;3.69e-14;46!UBERON:0002097;3.12e-13;41!UBERON:0003102;2.45e-11;50!UBERON:0002072;4.91e-09;5!UBERON:0005933;9.35e-08;2!UBERON:0005942;9.35e-08;2!UBERON:0005932;9.35e-08;2!UBERON:0000310;3.24e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,5.74e-23,46;UBERON:0002416,5.74e-23,46;UBERON:0003688,1.05e-17,6;UBERON:0002358,1.05e-17,6;UBERON:0003684,1.05e-17,6;UBERON:0001178,1.05e-17,6;UBERON:0002097,5.45e-17,41;UBERON:0001013,1.69e-15,14;UBERON:0004457,4.43e-15,12;UBERON:0000042,4.43e-15,12;UBERON:0002384,6.25e-13,371;UBERON:0003102,6.85e-12,99;UBERON:0002072,4.30e-09,5;UBERON:0005933,9.22e-08,2;UBERON:0005942,9.22e-08,2;UBERON:0005932,9.22e-08,2;UBERON:0000310,3.29e-07,10 | |||
|phase1_expression=4.1786027232228,3.42560838225573,1.9733616573436,6.00439790118782,6.70441641640932,2.61701557230111,0,1.89515962028049,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50590474292219,4.51204119572301,2.462390822334,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.25326102332916,2.1185468930115,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.469737994575059,0.971237666208789,0.280901613404497,0.816616685019573,0.122834317311768,0.309977343527296,0,0,1.82032272387605,0,0.168336113954066,0.125118519871964,1.38532057742091,1.31693286264251,1.22595118319608,0.600952235626387,0,4.66413052791041,4.27114777637135,8.05341224406335,1.20036438433761,1.95799805553034,2.83404594050192,2.79175284497385,1.5189869901714,0.292311015483596,6.05841058185875,5.61504381718026,0.161646056818812,1.77504796258307,1.81353776809752,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,8.8229906326076,10.1063127433742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0.845302752556,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,3.48613383440118,0.799783929456456,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,1.07057393278297,0.315404830067869,4.09994952474496,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,4.21783273291921,1.07423381301644,1.96462066103151,2.43464383585832,3.07024349440022,1.12597744800525,0,1.54209693802656,1.24293207719189,4.02423064467665,0,0.929683027679674,0,0,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0.308097234229289,0,0.137836572484531,0.214840489736547,0.145016693914229,0.255679882248303,0.267096106940212,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,1.09199929126389,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,2.11107635297664,24.0385271860728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,5.76813559793659,0,0,0,0,0,0,9.95326680517784,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.577901179803038,0,0,0,5.15718529703949,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,0,0,0,0.340776043570843,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07466329815372,1.63599316893057,10.5413113685497,1.89403005275089,4.27665432979378,18.6860356535273,0.457680136793847,0.604923695052956,0.310874401165561,0.147855149989634,0,0.899606224327209,0,0.829412415681711,0,0.521745061811734,0.150257608997218,2.28483127301277,0.813741466409323,0.181848659202559,0,0,0.796191777397232,0,1.71697852591396,1.34699795506368,0,0,0,0,5.66764813780681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0270720144315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,8.31916131536553,6.48939843185684,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.502055437748735,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr5:158181032..158181062,- | |short_description=p@chr5:158181032..158181062,- | ||
}} | }} |
Latest revision as of 12:21, 30 July 2015
Short description: | p@chr5:158181032..158181062, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:158181032..158181062, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.30e-24 | 76 |
skin fibroblast | 7.25e-19 | 23 |
fat cell | 6.32e-18 | 15 |
preadipocyte | 8.35e-18 | 12 |
mesenchymal cell | 2.30e-13 | 354 |
mesenchymal stem cell of adipose | 5.60e-13 | 8 |
connective tissue cell | 7.45e-13 | 361 |
motile cell | 4.63e-11 | 386 |
adipocyte of omentum tissue | 3.80e-10 | 3 |
multi fate stem cell | 1.73e-09 | 427 |
preadipocyte of the breast | 2.81e-09 | 3 |
omentum preadipocyte | 2.81e-09 | 3 |
somatic stem cell | 3.54e-09 | 433 |
stem cell | 8.91e-09 | 441 |
GAG secreting cell | 1.38e-08 | 9 |
carbohydrate secreting cell | 1.38e-08 | 9 |
outer root sheath cell | 9.22e-08 | 2 |
adipocyte of breast | 3.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
integument | 5.74e-23 | 46 |
integumental system | 5.74e-23 | 46 |
omentum | 1.05e-17 | 6 |
peritoneum | 1.05e-17 | 6 |
abdominal cavity | 1.05e-17 | 6 |
visceral peritoneum | 1.05e-17 | 6 |
skin of body | 5.45e-17 | 41 |
adipose tissue | 1.69e-15 | 14 |
cavity lining | 4.43e-15 | 12 |
serous membrane | 4.43e-15 | 12 |
connective tissue | 6.25e-13 | 371 |
surface structure | 6.85e-12 | 99 |
hypodermis | 4.30e-09 | 5 |
hair root sheath | 9.22e-08 | 2 |
hair outer root sheath | 9.22e-08 | 2 |
bulb of hair follicle | 9.22e-08 | 2 |
breast | 3.29e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.86e-15 | 5 |
myotonic disease | 3.86e-15 | 5 |
muscle tissue disease | 3.86e-15 | 5 |
myopathy | 3.86e-15 | 5 |
muscular disease | 3.86e-15 | 5 |
myotonic dystrophy | 3.86e-15 | 5 |