FFCP PHASE1:Hg19::chr6:41041401..41041428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:41041401..41041428,- | |||
|description=CAGE_peak_at_chr6:41041401..41041428,- | |description=CAGE_peak_at_chr6:41041401..41041428,- | ||
|id=chr6:41041401..41041428,- | |id=chr6:41041401..41041428,- | ||
|ontology_enrichment_celltype=CL:0000988!2.78e-15!182;CL:0000037!5.92e-15!172;CL:0000566!5.92e-15!172;CL:0002032!1.63e-12!165;CL:0000837!1.63e-12!165;CL:0000003!1.06e-11!722;CL:0000738!2.33e-11!140;CL:0000012!7.79e-09!682;CL:0002087!3.38e-08!119;CL:0002031!6.09e-08!124;CL:0000548!8.75e-08!679;CL:0000004!8.75e-08!679;CL:0000255!8.75e-08!679;CL:0000144!2.54e-07!625;CL:0000063!2.92e-07!578;CL:0000763!4.56e-07!112;CL:0000049!4.56e-07!112;CL:0002393!6.89e-07!9;CL:0002397!6.89e-07!9;CL:0000236!9.48e-07!14 | |ontology_enrichment_celltype=CL:0000988!2.78e-15!182;CL:0000037!5.92e-15!172;CL:0000566!5.92e-15!172;CL:0002032!1.63e-12!165;CL:0000837!1.63e-12!165;CL:0000003!1.06e-11!722;CL:0000738!2.33e-11!140;CL:0000012!7.79e-09!682;CL:0002087!3.38e-08!119;CL:0002031!6.09e-08!124;CL:0000548!8.75e-08!679;CL:0000004!8.75e-08!679;CL:0000255!8.75e-08!679;CL:0000144!2.54e-07!625;CL:0000063!2.92e-07!578;CL:0000763!4.56e-07!112;CL:0000049!4.56e-07!112;CL:0002393!6.89e-07!9;CL:0002397!6.89e-07!9;CL:0000236!9.48e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.90e-11;13!CL:0002393;7.22e-09;6!CL:0002397;7.22e-09;6!CL:0000875;4.21e-07;3!CL:0002396;4.21e-07;3!CL:1000746;5.81e-07;7!CL:1000612;5.81e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.30e-16,177;CL:0000037,5.39e-16,168;CL:0002393,1.38e-14,9;CL:0002397,1.38e-14,9;CL:0002032,2.00e-13,161;CL:0000837,2.00e-13,161;CL:0000738,5.02e-13,136;CL:0000236,6.40e-11,14;CL:0002031,3.24e-09,120;CL:0002087,4.37e-09,115;CL:0000875,1.53e-07,3;CL:0002396,1.53e-07,3;CL:0000838,2.68e-07,52;CL:0000134,2.73e-07,354;CL:0000763,3.04e-07,108;CL:0000049,3.04e-07,108;CL:0000542,4.36e-07,53;CL:0000051,4.36e-07,53;CL:0002320,7.00e-07,361;CL:1000746,8.42e-07,7;CL:1000612,8.42e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;5.81e-07;7!UBERON:0001229;5.81e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,8.42e-07,7;UBERON:0000074,8.42e-07,7;UBERON:0001229,8.42e-07,7;UBERON:0001230,8.42e-07,7;UBERON:0003220,8.42e-07,7;UBERON:0005749,8.42e-07,7;UBERON:0004199,8.42e-07,7;UBERON:0004209,8.42e-07,7;UBERON:0004198,8.42e-07,7;UBERON:0002384,9.55e-07,371 | |||
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| ||
|short_description=p@chr6:41041401..41041428,- | |short_description=p@chr6:41041401..41041428,- | ||
}} | }} |
Latest revision as of 01:31, 31 July 2015
Short description: | p@chr6:41041401..41041428, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:41041401..41041428, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.30e-16 | 177 |
hematopoietic stem cell | 5.39e-16 | 168 |
intermediate monocyte | 1.38e-14 | 9 |
CD14-positive, CD16-positive monocyte | 1.38e-14 | 9 |
hematopoietic oligopotent progenitor cell | 2.00e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-13 | 161 |
leukocyte | 5.02e-13 | 136 |
B cell | 6.40e-11 | 14 |
hematopoietic lineage restricted progenitor cell | 3.24e-09 | 120 |
nongranular leukocyte | 4.37e-09 | 115 |
non-classical monocyte | 1.53e-07 | 3 |
CD14-low, CD16-positive monocyte | 1.53e-07 | 3 |
lymphoid lineage restricted progenitor cell | 2.68e-07 | 52 |
mesenchymal cell | 2.73e-07 | 354 |
myeloid cell | 3.04e-07 | 108 |
common myeloid progenitor | 3.04e-07 | 108 |
lymphocyte | 4.36e-07 | 53 |
common lymphoid progenitor | 4.36e-07 | 53 |
connective tissue cell | 7.00e-07 | 361 |
glomerular cell | 8.42e-07 | 7 |
kidney corpuscule cell | 8.42e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 8.42e-07 | 7 |
renal glomerulus | 8.42e-07 | 7 |
renal corpuscle | 8.42e-07 | 7 |
glomerular capsule | 8.42e-07 | 7 |
metanephric mesenchyme | 8.42e-07 | 7 |
glomerular tuft | 8.42e-07 | 7 |
S-shaped body | 8.42e-07 | 7 |
renal vesicle | 8.42e-07 | 7 |
comma-shaped body | 8.42e-07 | 7 |
connective tissue | 9.55e-07 | 371 |