FFCP PHASE1:Hg19::chr7:27179852..27179863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3200 | |EntrezGene=3200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5104 | |HGNC=5104 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000521401_5end | |association_with_transcript=-8bp_to_ENST00000521401_5end | ||
|cluster_id=chr7:27179852..27179863,- | |||
|description=CAGE_peak_10_at_HOXA3_5end | |description=CAGE_peak_10_at_HOXA3_5end | ||
|id=chr7:27179852..27179863,- | |id=chr7:27179852..27179863,- | ||
|ontology_enrichment_celltype=CL:0002582!2.48e-07!3 | |ontology_enrichment_celltype=CL:0002582!2.48e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.92e-15;1!DOID:1909;1.20e-08;2!DOID:3350;2.23e-08;2!DOID:4468;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.34e-15,1;DOID:1909,1.20e-08,2;DOID:4468,1.61e-08,2;DOID:3350,1.86e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000489!4.75e-11!32;UBERON:0006554!1.13e-10!44;UBERON:0001008!2.41e-10!45;UBERON:0002113!5.90e-10!27;UBERON:0003918!5.90e-10!27;UBERON:0005095!5.90e-10!27;UBERON:0007687!5.90e-10!27;UBERON:0000059!2.57e-09!11;UBERON:0003887!6.33e-09!21;UBERON:0000080!7.28e-09!18;UBERON:0002120!7.28e-09!18;UBERON:0004875!7.28e-09!18;UBERON:0005721!7.28e-09!18;UBERON:0005754!7.28e-09!18;UBERON:0007297!7.28e-09!18;UBERON:0004907!4.64e-08!5;UBERON:0006947!4.83e-08!3;UBERON:0004054!4.83e-08!3;UBERON:0005177!7.07e-08!107;UBERON:0004876!8.45e-08!20;UBERON:0005409!9.08e-08!35;UBERON:0000160!1.04e-07!27;UBERON:0006555!1.69e-07!17;UBERON:0005103!1.69e-07!17;UBERON:0000083!1.69e-07!17;UBERON:0009201!1.69e-07!17;UBERON:0004819!1.69e-07!17;UBERON:0006553!1.69e-07!17;UBERON:0003074!1.69e-07!17;UBERON:0003060!1.69e-07!17;UBERON:0000058!4.88e-07!26 | |ontology_enrichment_uberon=UBERON:0000489!4.75e-11!32;UBERON:0006554!1.13e-10!44;UBERON:0001008!2.41e-10!45;UBERON:0002113!5.90e-10!27;UBERON:0003918!5.90e-10!27;UBERON:0005095!5.90e-10!27;UBERON:0007687!5.90e-10!27;UBERON:0000059!2.57e-09!11;UBERON:0003887!6.33e-09!21;UBERON:0000080!7.28e-09!18;UBERON:0002120!7.28e-09!18;UBERON:0004875!7.28e-09!18;UBERON:0005721!7.28e-09!18;UBERON:0005754!7.28e-09!18;UBERON:0007297!7.28e-09!18;UBERON:0004907!4.64e-08!5;UBERON:0006947!4.83e-08!3;UBERON:0004054!4.83e-08!3;UBERON:0005177!7.07e-08!107;UBERON:0004876!8.45e-08!20;UBERON:0005409!9.08e-08!35;UBERON:0000160!1.04e-07!27;UBERON:0006555!1.69e-07!17;UBERON:0005103!1.69e-07!17;UBERON:0000083!1.69e-07!17;UBERON:0009201!1.69e-07!17;UBERON:0004819!1.69e-07!17;UBERON:0006553!1.69e-07!17;UBERON:0003074!1.69e-07!17;UBERON:0003060!1.69e-07!17;UBERON:0000058!4.88e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.96e-15;4!UBERON:0000160;6.54e-13;17!UBERON:0004907;2.12e-12;5!UBERON:0002108;2.99e-12;4!UBERON:0005409;3.64e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,2.39e-15,4;UBERON:0000160,5.96e-13,17;UBERON:0004907,1.79e-12,5;UBERON:0002108,2.99e-12,4;UBERON:0005409,4.77e-09,25 | |||
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| ||
|short_description=p10@HOXA3 | |short_description=p10@HOXA3 | ||
}} | }} |
Latest revision as of 01:26, 18 September 2015
Short description: | p10@HOXA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HOXA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000521401_5end |
EntrezGene: | HOXA3 |
HGNC: | 5104 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
rectum | 2.39e-15 | 4 |
intestine | 5.96e-13 | 17 |
lower digestive tract | 1.79e-12 | 5 |
small intestine | 2.99e-12 | 4 |
gastrointestinal system | 4.77e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.34e-15 | 1 |
melanoma | 1.20e-08 | 2 |
clear cell adenocarcinoma | 1.61e-08 | 2 |
mesenchymal cell neoplasm | 1.86e-08 | 2 |