FFCP PHASE1:Hg19::chr7:45956805..45956831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:45956805..45956831,+ | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45956805..45956831,+ | |description=CAGE_peak_at_chr7:45956805..45956831,+ | ||
|id=chr7:45956805..45956831,+ | |id=chr7:45956805..45956831,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.02e-12!180;CL:0000057!1.99e-10!75;CL:0000359!7.31e-09!32;CL:0002620!7.85e-08!23;CL:0002334!3.03e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.02e-12!180;CL:0000057!1.99e-10!75;CL:0000359!7.31e-09!32;CL:0002620!7.85e-08!23;CL:0002334!3.03e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.84e-15;23!CL:0002334;2.56e-11;12!CL:0002595;1.58e-10;5!CL:0000349;6.21e-10;19!CL:0000153;6.85e-09;9!CL:0000447;6.85e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.68e-15,23;CL:0000057,1.49e-14,76;CL:0002334,2.63e-11,12;CL:0002595,1.71e-10,5;CL:0000349,8.58e-10,19;CL:0000153,6.57e-09,9;CL:0000447,6.57e-09,9;CL:0000048,6.18e-08,427;CL:0000723,1.39e-07,433;CL:0000034,3.94e-07,441;CL:0002580,9.28e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.22e-11;5!DOID:450;5.22e-11;5!DOID:66;5.22e-11;5!DOID:423;5.22e-11;5!DOID:0080000;5.22e-11;5!DOID:11722;5.22e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.70e-11,5;DOID:450,4.70e-11,5;DOID:66,4.70e-11,5;DOID:423,4.70e-11,5;DOID:0080000,4.70e-11,5;DOID:11722,4.70e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.08e-10!14;UBERON:0000158!4.08e-10!14;UBERON:0000478!4.16e-07!24;UBERON:0003124!4.31e-07!7;UBERON:0004923!4.31e-07!57;UBERON:0002385!5.55e-07!63;UBERON:0001015!5.55e-07!63;UBERON:0000383!5.55e-07!63 | |ontology_enrichment_uberon=UBERON:0005631!4.08e-10!14;UBERON:0000158!4.08e-10!14;UBERON:0000478!4.16e-07!24;UBERON:0003124!4.31e-07!7;UBERON:0004923!4.31e-07!57;UBERON:0002385!5.55e-07!63;UBERON:0001015!5.55e-07!63;UBERON:0000383!5.55e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.49e-10;24!UBERON:0003834;1.58e-10;5!UBERON:0001533;1.58e-10;5!UBERON:0004457;8.59e-10;9!UBERON:0000042;8.59e-10;9!UBERON:0001987;5.11e-08;4!UBERON:0002097;1.28e-07;41!UBERON:0003688;1.56e-07;6!UBERON:0002358;1.56e-07;6!UBERON:0003684;1.56e-07;6!UBERON:0001178;1.56e-07;6!UBERON:0002199;1.63e-07;46!UBERON:0002416;1.63e-07;46!UBERON:0003513;2.30e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.45e-12,14;UBERON:0000158,4.45e-12,14;UBERON:0003834,1.71e-10,5;UBERON:0001533,1.71e-10,5;UBERON:0000478,1.92e-10,24;UBERON:0002199,5.02e-10,46;UBERON:0002416,5.02e-10,46;UBERON:0003124,1.04e-09,7;UBERON:0002097,2.27e-09,41;UBERON:0001987,6.76e-08,4;UBERON:0004340,6.76e-08,4;UBERON:0003513,2.42e-07,7;UBERON:0003688,2.71e-07,6;UBERON:0002358,2.71e-07,6;UBERON:0003684,2.71e-07,6;UBERON:0001178,2.71e-07,6;UBERON:0004457,6.66e-07,12;UBERON:0000042,6.66e-07,12 | |||
|phase1_expression=3.81524596468169,1.07050261945492,1.12763523276777,1.0007329835313,0.446961094427288,6.97870819280295,0,0.631719873426831,1.04474251279935,1.47440361900905,0,0.436882744260345,0,0,0.331397375727916,0.672325146451775,0,1.46062018077475,0,0,0,0.626909442956176,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17366355134002,105.540232496293,49.6324531529531,36.0667832212451,0,22.3852040339212,0,0,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,0,0.286836620748814,0,1.68203280042692,2.1349799145941,0.98667019366864,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,2.14541457059314,0.751190294532984,0,5.02290979928813,5.12537733164562,7.2056846394251,8.40255069036326,2.88547081867629,3.60696756063881,8.00302482225836,3.03797398034279,2.43592512902997,10.0973509697646,11.2300876343605,0.161646056818812,13.1353549231147,5.54136540252021,2.20428770003634,0,0,0,0,0,0.232387885739037,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0.531876233169741,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,1.19812427745791,1.14861935834114,0,2.17171960001369,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,4.15941723061614,2.14114786556594,1.89242898040722,0.819989904948992,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,1.21251028578504,3.32870879020994,2.11673205330776,2.48107807818777,3.6830873589135,2.24528075546459,2.05022638809122,3.58195074346692,1.44768529029247,2.96836132889982,0,1.24293207719189,0.657017248110473,0,1.04589340613963,0,0.601519410909855,0,0.34444334449382,0.182091168006717,0.262248829918848,0.451199612907412,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,3.1481234683064,0,0,0.532306030317022,0,3.89180860118232,3.14874750832381,0,0.632758849437452,0.190630193923825,0,0,0.636406495851874,0.78494864019923,0,0,0,0,3.17020642346017,0.421258456238981,0.48763373908959,2.43713489631284,2.11300293513511,0,0,2.26016233240486,2.2054613741845,10.6150236038595,10.0843703608365,0,0,0.811641507850816,0,0.281695602532241,0,0.196498082026242,1.07001315444375,0.354761064070598,7.81098250601357,5.59801318031833,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,2.86493381685228,5.04839957415486,1.22864280839693,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,14.618860620105,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0.709163045303809,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,5.42301971544263,0.549585560411174,2.66517388009317,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.416024019039416,1.04135843001079,0.0979923974143777,0.34823682632161,0,3.0957485844891,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,1.59847687665704,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.509991088181609,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.604651252380536,5.76479813667846,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0.157363764404994,0,1.43429871466276,0,0,0,1.5256112259285,3.80099721227599,0.864221491201268,0.653174720218818,0,0,0,0,0.146552233678082,0,0,0,0.513260513652988,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0.570930667089935,0.470531639396343,0,0,0,2.10341978862502,0,0.757612021100357,1.76097531226803,5.33886732957922,0,1.81477108515887,0.621748802331122,0.147855149989634,0,1.34940933649081,0,1.24411862352257,0,0.521745061811734,0.150257608997218,1.52322084867518,0,0,0,0.928067519756987,1.19428766609585,0,0,1.01024846629776,1.26184898228651,0,0,0,0.680117776536817,0,0,2.14906609297785,1.54400723580486,0,0.176689145945881,0.578742114812744,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0.212574920101683,0,0,1.59002175326709,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,2.31051332300676,0,0,0,0.376051641746286,0.20170506870352,0,0,0.49131575253029,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,3.19406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| ||
|short_description=p@chr7:45956805..45956831,+ | |short_description=p@chr7:45956805..45956831,+ | ||
}} | }} |
Latest revision as of 10:26, 31 July 2015
Short description: | p@chr7:45956805..45956831, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45956805..45956831, + |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.68e-15 | 23 |
fibroblast | 1.49e-14 | 76 |
preadipocyte | 2.63e-11 | 12 |
smooth muscle cell of the subclavian artery | 1.71e-10 | 5 |
extraembryonic cell | 8.58e-10 | 19 |
GAG secreting cell | 6.57e-09 | 9 |
carbohydrate secreting cell | 6.57e-09 | 9 |
multi fate stem cell | 6.18e-08 | 427 |
somatic stem cell | 1.39e-07 | 433 |
stem cell | 3.94e-07 | 441 |
preadipocyte of the breast | 9.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.45e-12 | 14 |
membranous layer | 4.45e-12 | 14 |
thoracic segment blood vessel | 1.71e-10 | 5 |
subclavian artery | 1.71e-10 | 5 |
extraembryonic structure | 1.92e-10 | 24 |
integument | 5.02e-10 | 46 |
integumental system | 5.02e-10 | 46 |
chorion | 1.04e-09 | 7 |
skin of body | 2.27e-09 | 41 |
placenta | 6.76e-08 | 4 |
allantois | 6.76e-08 | 4 |
trunk blood vessel | 2.42e-07 | 7 |
omentum | 2.71e-07 | 6 |
peritoneum | 2.71e-07 | 6 |
abdominal cavity | 2.71e-07 | 6 |
visceral peritoneum | 2.71e-07 | 6 |
cavity lining | 6.66e-07 | 12 |
serous membrane | 6.66e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.70e-11 | 5 |
myotonic disease | 4.70e-11 | 5 |
muscle tissue disease | 4.70e-11 | 5 |
myopathy | 4.70e-11 | 5 |
muscular disease | 4.70e-11 | 5 |
myotonic dystrophy | 4.70e-11 | 5 |