FFCP PHASE1:Hg19::chr4:107957459..107957475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27123 | |EntrezGene=27123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2892 | |HGNC=2892 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBU2 | |UniProt=Q9UBU2 | ||
|association_with_transcript=-5bp_to_ENST00000285311_5end | |association_with_transcript=-5bp_to_ENST00000285311_5end | ||
|cluster_id=chr4:107957459..107957475,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_1_at_DKK2_5end | |description=CAGE_peak_1_at_DKK2_5end | ||
|id=chr4:107957459..107957475,- | |id=chr4:107957459..107957475,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;4.10e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.02e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.77e-22!90;UBERON:0007023!1.42e-21!115;UBERON:0003075!3.31e-19!86;UBERON:0007284!3.31e-19!86;UBERON:0001049!9.16e-18!57;UBERON:0005068!9.16e-18!57;UBERON:0006241!9.16e-18!57;UBERON:0007135!9.16e-18!57;UBERON:0003056!1.06e-16!61;UBERON:0002616!1.08e-16!59;UBERON:0002780!9.93e-16!41;UBERON:0001890!9.93e-16!41;UBERON:0006240!9.93e-16!41;UBERON:0000955!2.28e-15!69;UBERON:0006238!2.28e-15!69;UBERON:0003080!4.16e-15!42;UBERON:0000073!2.36e-14!94;UBERON:0001016!2.36e-14!94;UBERON:0002020!2.58e-14!34;UBERON:0003528!2.58e-14!34;UBERON:0001893!2.74e-14!34;UBERON:0001017!3.49e-14!82;UBERON:0002791!1.24e-13!33;UBERON:0005743!1.33e-13!86;UBERON:0001869!2.26e-13!32;UBERON:0000153!4.47e-13!129;UBERON:0007811!4.47e-13!129;UBERON:0001950!4.50e-13!20;UBERON:0000924!4.95e-13!173;UBERON:0006601!4.95e-13!173;UBERON:0002619!7.65e-13!22;UBERON:0000033!3.95e-12!123;UBERON:0000956!7.97e-12!25;UBERON:0000203!7.97e-12!25;UBERON:0004121!5.83e-11!169;UBERON:0000468!3.74e-09!659;UBERON:0000475!7.36e-08!365;UBERON:0001871!1.30e-07!7;UBERON:0000479!1.36e-07!787;UBERON:0000064!7.80e-07!219 | |ontology_enrichment_uberon=UBERON:0002346!1.77e-22!90;UBERON:0007023!1.42e-21!115;UBERON:0003075!3.31e-19!86;UBERON:0007284!3.31e-19!86;UBERON:0001049!9.16e-18!57;UBERON:0005068!9.16e-18!57;UBERON:0006241!9.16e-18!57;UBERON:0007135!9.16e-18!57;UBERON:0003056!1.06e-16!61;UBERON:0002616!1.08e-16!59;UBERON:0002780!9.93e-16!41;UBERON:0001890!9.93e-16!41;UBERON:0006240!9.93e-16!41;UBERON:0000955!2.28e-15!69;UBERON:0006238!2.28e-15!69;UBERON:0003080!4.16e-15!42;UBERON:0000073!2.36e-14!94;UBERON:0001016!2.36e-14!94;UBERON:0002020!2.58e-14!34;UBERON:0003528!2.58e-14!34;UBERON:0001893!2.74e-14!34;UBERON:0001017!3.49e-14!82;UBERON:0002791!1.24e-13!33;UBERON:0005743!1.33e-13!86;UBERON:0001869!2.26e-13!32;UBERON:0000153!4.47e-13!129;UBERON:0007811!4.47e-13!129;UBERON:0001950!4.50e-13!20;UBERON:0000924!4.95e-13!173;UBERON:0006601!4.95e-13!173;UBERON:0002619!7.65e-13!22;UBERON:0000033!3.95e-12!123;UBERON:0000956!7.97e-12!25;UBERON:0000203!7.97e-12!25;UBERON:0004121!5.83e-11!169;UBERON:0000468!3.74e-09!659;UBERON:0000475!7.36e-08!365;UBERON:0001871!1.30e-07!7;UBERON:0000479!1.36e-07!787;UBERON:0000064!7.80e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002050;6.30e-15;5!UBERON:0005423;6.30e-15;5!UBERON:0002346;2.16e-12;4!UBERON:0000923;2.16e-12;4!UBERON:0010316;2.16e-12;4!UBERON:0005291;2.16e-12;4!UBERON:0000922;1.20e-10;49!UBERON:0001871;2.30e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.54e-10,86;UBERON:0001871,2.73e-08,6;UBERON:0010371,1.54e-07,104;UBERON:0003075,6.70e-07,82;UBERON:0007284,6.70e-07,82;UBERON:0004121,6.85e-07,171;UBERON:0000924,6.85e-07,171;UBERON:0006601,6.85e-07,171 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0.140954404095971,7.00513088471913,2.23480547213644,0,2.53299878168311,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0.612002073732759,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,1.81446068902259,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.351339142772504,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0.838998872419812,1.6507082516404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0,0.756787138224657,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0.113432183160021,0,6.19316427573846,1.90738711043606,0.300091096084402,1.95799805553034,0,2.41951913231067,0,0,0,6.71964260088785,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,2.57296375277154,0,2.3218396401599,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,5.49016992955282,0,0,0,0,0.651616610620649,2.07986957055916,0,0,7.0445216541493,0,0,0,0,0,0.492434012174795,0.468008530278475,0.148631162288728,0,0,0,0,0,0,1.97065295158377,0,0.621984346622316,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.4400297149257,0.258543431515556,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0.289562613335158,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0,0,2.14846762603287,0.561320188866147,0,5.62877973973374,0.64341568457443,0,2.92998418225046,0.710246901252508,1.64254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0,2.20368642781448,2.0911118104818,0,0,2.60979897622522,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.02715625799852,2.06322986127554,0,0,0,0,4.17420491142287,5.24902080367474,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.481764225311099,0.605399121573143,0,0,0.614481528616916,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.890894042497916,0,1.9882952955326,1.1253553312841,0,0,1.68900326502395,0.597743964753209,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,1.20598527610407,0,0,0,0,0,0,0,0,80.1912686803949,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,5.92340572315726,0,0,2.00070672109872,0,0,0,0,0.31900115973192,0.732780747214898,0,0,1.56980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0.611030144933625,2.37216902944498,2.34771483998355,2.50612678813093,0.067401132980677,4.81546588379273,1.63985112007737,0,0,0,0,1.20990716048664,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.0969890164884194,0,8.81324889044077,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.547621515567972,0,0,0,1.95497680890578,0,0,0.599037001496973,1.28767814440971,0.446342914883745,1.14211903227435,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0.674921674654501,0,0.971992906528395,0,0.0788057072991982,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,2.56289790162467,1.10043013569766,3.31391244277756,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.732157589411779,1.001527445652,1.72022758707021,0.776503360757966,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776314784381297,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8958072321835,0.655257829152084,21.8954963640693,39.3263602188113,290.257559894583,3.91051442581271,0,0,0,1.05802783107205,5.5124185923576,0.899209151350433,0,0.957803154342908,1.64093091392604,0.252071696221718,0.96820153449905,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.742913430802341,0,0.826747186004736,1.07806877329642,0.546974809018219,0,0.992422356778588,6.8589785300252,0,0.535701835878287,1.00885116665647,0,0.227662191351298,0.0887023701626388,0.230467975111559,0,0.339848664884159,0.591954962065642,0,0,0.078493092850514,0,0,10.9579046461139,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,8.11870101936739,19.4284397223656,0.467878926924211,0,1.18920090777569,50.712790835493,0,0,0.231522474323834,0.437119121007915,0,0,0,0.392616934229891,0,2.5359343655004,0,0.18796783595970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| ||
|short_description=p1@DKK2 | |short_description=p1@DKK2 | ||
}} | }} |
Latest revision as of 07:31, 20 September 2015
Short description: | p1@DKK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DKK2_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -5bp_to_ENST00000285311_5end |
EntrezGene: | DKK2 |
HGNC: | 2892 |
UniProt: | Q9UBU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.54e-10 | 86 |
temporal lobe | 2.73e-08 | 6 |
ecto-epithelium | 1.54e-07 | 104 |
neural plate | 6.70e-07 | 82 |
presumptive neural plate | 6.70e-07 | 82 |
ectoderm-derived structure | 6.85e-07 | 171 |
ectoderm | 6.85e-07 | 171 |
presumptive ectoderm | 6.85e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.02e-10 | 10 |