FFCP PHASE1:Hg19::chr9:116327296..116327307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000463806,ENST00000489082_5end | |association_with_transcript=-29bp_to_ENST00000463806,ENST00000489082_5end | ||
|cluster_id=chr9:116327296..116327307,+ | |||
|description=CAGE_peak_21_at_RGS3_5end | |description=CAGE_peak_21_at_RGS3_5end | ||
|id=chr9:116327296..116327307,+ | |id=chr9:116327296..116327307,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002575;4.83e-18;2!CL:0002367;1.45e-17;2!CL:0002174;1.20e-09;1!CL:0002581;1.20e-09;1!CL:0000501;1.20e-09;1!CL:0000669;1.76e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.24e-18,2;CL:0002367,1.88e-17,2;CL:0002174,5.31e-10,1;CL:0000501,5.31e-10,1;CL:0002581,9.70e-10,1;CL:0000669,1.20e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.65e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001444!1.45e-07!48;UBERON:0000481!2.90e-07!347;UBERON:0000033!6.08e-07!123;UBERON:0001801!6.78e-07!14 | |ontology_enrichment_uberon=UBERON:0001444!1.45e-07!48;UBERON:0000481!2.90e-07!347;UBERON:0000033!6.08e-07!123;UBERON:0001801!6.78e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.45e-17;2!UBERON:0002757;1.45e-17;2!UBERON:0010134;1.45e-17;2!UBERON:0005408;1.45e-17;2!UBERON:0005969;1.45e-17;2!UBERON:0001899;1.45e-17;2!UBERON:0003956;1.45e-17;2!UBERON:0001801;1.08e-09;14!UBERON:0003296;3.03e-09;4!UBERON:0010133;3.03e-09;4!UBERON:0002784;3.03e-09;4!UBERON:0000019;3.54e-07;19!UBERON:0000047;3.54e-07;19!UBERON:0004088;3.54e-07;19!UBERON:0010230;3.54e-07;19!UBERON:0000970;7.98e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,1.88e-17,2;UBERON:0003956,1.88e-17,2;UBERON:0001905,2.85e-17,2;UBERON:0002757,2.85e-17,2;UBERON:0010134,2.85e-17,2;UBERON:0005408,2.85e-17,2;UBERON:0001899,2.85e-17,2;UBERON:0001801,1.01e-09,14;UBERON:0003296,4.23e-09,4;UBERON:0010133,4.23e-09,4;UBERON:0002784,4.23e-09,4;UBERON:0000019,7.63e-07,20;UBERON:0000047,7.63e-07,20;UBERON:0010312,7.63e-07,20;UBERON:0004088,7.63e-07,20;UBERON:0010230,7.63e-07,20;UBERON:0003072,7.63e-07,20;UBERON:0004128,7.63e-07,20;UBERON:0003071,7.63e-07,20 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.738726348460727,0.612002073732759,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,1.00267582127178,0.144846518960824,0.795285947051099,0.973269740605272,0.283604451492204,0.443458794925128,0.43917392846563,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,1.06748995729705,0.74000264525148,0,0.134710672069688,0.326923806226917,0.756787138224657,0,0.70296429550139,0,0,0,0.117434498643765,0,0,0.408308342509787,0.491337269247072,0.309977343527296,0,0.989067717114227,0,0,0.505008341862199,0.125118519871964,0.277064115484183,0,0.30648779579902,0.45071417671979,0,0,0.213557388818567,0.635795703478686,0.600182192168805,0.412210116953756,0,0.37223371266318,0,0.876933046450788,0,0,0,0.355009592516614,0.201504196455281,0.339121184620975,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,1.62904152655162,0,1.44331342025273,0.463721619900307,0.469634776943287,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.626909658919938,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.784917590417525,0,0.07333828582095,0.258543431515556,3.57656445851882,0,0,0,1.28603687131071,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0,0.410952645100767,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.473107245101804,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0,0.0868836144680828,3.91602314925481,1.71571711905428,0,0,0,0,1.66435439510497,0.604780586659361,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0.482561763430822,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.40101294060657,0.0920809889358963,0.229628896329213,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.671624264166535,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0,0,0.275673144969061,0,0,0,0.178064071293475,0.661139661443912,0.576570202095319,0.127612712494584,0.4046311234222,1.39453664789186,0,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0.744316738719335,0,0.190630193923825,0.511795582622668,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0.845086807596724,0,0.491245205065606,0,0.354761064070598,0,0,1.51789269506286,1.04980416073495,0.48111056362756,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0.779160935160341,0,0,0.796991953004279,0,0,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,2.18649999990489,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0.41827123283581,0.153900517007594,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0.468528891450678,0,0.391329237864179,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0.288180834308212,0,0,0.14405479798815,0.124252535565433,0,0,0,0.101998217636322,0,0,0.136905378891993,0,1.71906176567983,0,0.279282401272254,0.458320848023367,0,0.599037001496973,0.858452096273142,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0.550157746388935,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0.575745591958336,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,1.01980882368113,0,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0.249960815924213,0,0,0.705797459094515,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0,0,0,0,0.899606224327209,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,0.859284456339908,0,0.398095888698616,0.800055529326307,0,0.336749488765919,0,0.770479321629213,0.214441591374926,0.521988583930423,0.226705925512272,0.463044948647668,0,0.179088841081487,0.308801447160972,0.657852148736121,0.176689145945881,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,1.63804924423206,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0.622077260032973,0.127894371303652,1.50954735955355,0,0,0.3394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| ||
|short_description=p21@RGS3 | |short_description=p21@RGS3 | ||
}} | }} |
Latest revision as of 07:20, 20 September 2015
Short description: | p21@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000463806, ENST00000489082_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.24e-18 | 2 |
trabecular meshwork cell | 1.88e-17 | 2 |
follicular cell of ovary | 5.31e-10 | 1 |
granulosa cell | 5.31e-10 | 1 |
perirenal preadipocyte | 9.70e-10 | 1 |
pericyte cell | 1.20e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 1.88e-17 | 2 |
aqueous drainage system | 1.88e-17 | 2 |
pineal body | 2.85e-17 | 2 |
regional part of epithalamus | 2.85e-17 | 2 |
secretory circumventricular organ | 2.85e-17 | 2 |
circumventricular organ | 2.85e-17 | 2 |
epithalamus | 2.85e-17 | 2 |
anterior segment of eyeball | 1.01e-09 | 14 |
gland of diencephalon | 4.23e-09 | 4 |
neuroendocrine gland | 4.23e-09 | 4 |
regional part of diencephalon | 4.23e-09 | 4 |
camera-type eye | 7.63e-07 | 20 |
simple eye | 7.63e-07 | 20 |
immature eye | 7.63e-07 | 20 |
ocular region | 7.63e-07 | 20 |
eyeball of camera-type eye | 7.63e-07 | 20 |
optic cup | 7.63e-07 | 20 |
optic vesicle | 7.63e-07 | 20 |
eye primordium | 7.63e-07 | 20 |