FFCP PHASE1:Hg19::chr9:118701892..118701903,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:118701892..118701903,+ | |||
|coexpression_cluster_id=C679 | |||
|description=CAGE_peak_at_chr9:118701892..118701903,+ | |description=CAGE_peak_at_chr9:118701892..118701903,+ | ||
|id=chr9:118701892..118701903,+ | |id=chr9:118701892..118701903,+ | ||
|ontology_enrichment_celltype=CL:0000187!3.37e-21!54;CL:0000680!7.23e-21!57;CL:0000056!7.23e-21!57;CL:0000355!7.23e-21!57;CL:0000183!7.23e-20!59;CL:0000393!4.42e-18!60;CL:0000211!4.42e-18!60;CL:0000055!4.61e-17!180;CL:0000192!9.58e-17!42;CL:0000514!9.58e-17!42;CL:0000222!4.53e-14!119;CL:0000359!3.74e-12!32;CL:0000057!2.63e-09!75;CL:0000548!1.06e-08!679;CL:0000004!1.06e-08!679;CL:0000255!1.06e-08!679;CL:0000144!1.51e-08!625;CL:0000012!1.62e-08!682;CL:0002494!1.18e-07!16 | |ontology_enrichment_celltype=CL:0000187!3.37e-21!54;CL:0000680!7.23e-21!57;CL:0000056!7.23e-21!57;CL:0000355!7.23e-21!57;CL:0000183!7.23e-20!59;CL:0000393!4.42e-18!60;CL:0000211!4.42e-18!60;CL:0000055!4.61e-17!180;CL:0000192!9.58e-17!42;CL:0000514!9.58e-17!42;CL:0000222!4.53e-14!119;CL:0000359!3.74e-12!32;CL:0000057!2.63e-09!75;CL:0000548!1.06e-08!679;CL:0000004!1.06e-08!679;CL:0000255!1.06e-08!679;CL:0000144!1.51e-08!625;CL:0000012!1.62e-08!682;CL:0002494!1.18e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002504;3.08e-19;3!CL:1000279;3.08e-19;3!CL:1000280;3.08e-19;3!CL:0002195;4.23e-14;2!CL:0002571;4.23e-14;2!CL:0000594;2.63e-09;3!CL:0000342;2.13e-07;1!CL:0002550;2.13e-07;1!CL:0002557;2.13e-07;1!CL:0002565;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,6.54e-20,3;CL:1000279,6.54e-20,3;CL:1000280,6.54e-20,3;CL:0002195,4.27e-14,2;CL:0002571,4.27e-14,2;CL:0000594,1.98e-09,3;CL:0000187,9.70e-08,55;CL:0002557,9.71e-08,1;CL:0000342,1.83e-07,1;CL:0002565,1.83e-07,1;CL:0000680,2.90e-07,58;CL:0000056,2.90e-07,58;CL:0000355,2.90e-07,58;CL:0002550,3.20e-07,1;CL:0000393,7.77e-07,61;CL:0000211,7.77e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.13e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.84e-19!83;UBERON:0002329!1.84e-19!83;UBERON:0003077!1.84e-19!83;UBERON:0003059!1.84e-19!83;UBERON:0007282!1.84e-19!83;UBERON:0009618!1.84e-19!83;UBERON:0007285!1.84e-19!83;UBERON:0001134!7.94e-19!61;UBERON:0002036!7.94e-19!61;UBERON:0003082!7.94e-19!61;UBERON:0004290!1.17e-18!70;UBERON:0002385!6.59e-18!63;UBERON:0001015!6.59e-18!63;UBERON:0000383!6.59e-18!63;UBERON:0000486!2.17e-15!82;UBERON:0005256!1.42e-14!143;UBERON:0002200!7.73e-11!11;UBERON:0006876!7.73e-11!11;UBERON:0000490!2.34e-10!138;UBERON:0004535!9.41e-10!110;UBERON:0002049!1.77e-09!79;UBERON:0007798!1.77e-09!79;UBERON:0001009!3.11e-09!113;UBERON:0004872!5.02e-09!84;UBERON:0002100!1.03e-08!216;UBERON:0000481!1.26e-08!347;UBERON:0003104!1.52e-08!238;UBERON:0009142!1.52e-08!238;UBERON:0005284!1.62e-08!5;UBERON:0001637!2.24e-07!42;UBERON:0003509!2.24e-07!42;UBERON:0004572!2.24e-07!42;UBERON:0000483!2.57e-07!309;UBERON:0000119!4.32e-07!312 | |ontology_enrichment_uberon=UBERON:0000914!1.84e-19!83;UBERON:0002329!1.84e-19!83;UBERON:0003077!1.84e-19!83;UBERON:0003059!1.84e-19!83;UBERON:0007282!1.84e-19!83;UBERON:0009618!1.84e-19!83;UBERON:0007285!1.84e-19!83;UBERON:0001134!7.94e-19!61;UBERON:0002036!7.94e-19!61;UBERON:0003082!7.94e-19!61;UBERON:0004290!1.17e-18!70;UBERON:0002385!6.59e-18!63;UBERON:0001015!6.59e-18!63;UBERON:0000383!6.59e-18!63;UBERON:0000486!2.17e-15!82;UBERON:0005256!1.42e-14!143;UBERON:0002200!7.73e-11!11;UBERON:0006876!7.73e-11!11;UBERON:0000490!2.34e-10!138;UBERON:0004535!9.41e-10!110;UBERON:0002049!1.77e-09!79;UBERON:0007798!1.77e-09!79;UBERON:0001009!3.11e-09!113;UBERON:0004872!5.02e-09!84;UBERON:0002100!1.03e-08!216;UBERON:0000481!1.26e-08!347;UBERON:0003104!1.52e-08!238;UBERON:0009142!1.52e-08!238;UBERON:0005284!1.62e-08!5;UBERON:0001637!2.24e-07!42;UBERON:0003509!2.24e-07!42;UBERON:0004572!2.24e-07!42;UBERON:0000483!2.57e-07!309;UBERON:0000119!4.32e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;5.26e-09;11!UBERON:0002506;2.13e-07;1!UBERON:0001769;2.13e-07;1!UBERON:0001987;5.53e-07;4!UBERON:0001155;9.92e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,5.63e-09,11;UBERON:0002506,1.83e-07,1;UBERON:0001769,1.83e-07,1;UBERON:0001987,4.22e-07,4;UBERON:0004340,4.22e-07,4;UBERON:0001155,6.05e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0.527533956456907,0.74259811776028,0.662794751455832,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91793842765295,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25095607382472,0.286836620748814,0,0,0,0.49333509683432,0.622422070799533,1.21239604862719,0.326923806226917,0.908144565869588,1.72852777344,1.17160715916898,0.624320153660641,0,0.149448680551801,0.23486899728753,0,0,1.22492502752936,0,1.13658359293342,0,0,0,1.43723628363248,0,0.125118519871964,0,0,0,0.150238058906597,1.92834711372036,0,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,1.54411029268673,0,0,0.100528972411631,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0101514672844,0,0,0,4.97548728239564,0.791951872933429,0.602878754119172,0,1.09970290300263,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0.561320188866147,0,0,0,0,0,0.177561725313127,0,1.03850885836724,0.116210378459959,0,0,0,1.60740227430449,0.364182336013434,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0.275673144969061,2.0409846524972,1.74020032697074,0.340906509664404,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0.316379424718726,1.33441135746677,0,0.42793898803392,0.318203247925937,0,1.97859703341646,1.92175920815238,3.53437207037059,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0,0.565621727814851,0,0,0.66343897524122,0.438450885253763,1.15755106853338,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,1.78335525740625,0,0,0,0.379473173765715,1.04980416073495,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.797594390929008,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.365446585430928,0,0,0.264768380074501,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0.941063278792687,0,0,0.298509605773748,0,0,0,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0.955780602982214,0,0.465788870628778,0,0,0.521745061811734,0.150257608997218,1.14241563650639,0,0,0.322231671127465,0,0,0,0,0.336749488765919,0,0,1.28664954824955,0.260994291965212,0,0.694567422971502,0.244736704506468,1.79088841081487,0,0,0.176689145945881,0.964570191354574,0,0,0,0.911579868532147,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0.436882744260345,0.527533956456907,0.74259811776028,0.662794751455832,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91793842765295,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25095607382472,0.286836620748814,0,0,0,0.49333509683432,0.622422070799533,1.21239604862719,0.326923806226917,0.908144565869588,1.72852777344,1.17160715916898,0.624320153660641,0,0.149448680551801,0.23486899728753,0,0,1.22492502752936,0,1.13658359293342,0,0,0,1.43723628363248,0,0.125118519871964,0,0,0,0.150238058906597,1.92834711372036,0,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,1.54411029268673,0,0,0.100528972411631,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0101514672844,0,0,0,4.97548728239564,0.791951872933429,0.602878754119172,0,1.09970290300263,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0.561320188866147,0,0,0,0,0,0.177561725313127,0,1.03850885836724,0.116210378459959,0,0,0,1.60740227430449,0.364182336013434,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0.275673144969061,2.0409846524972,1.74020032697074,0.340906509664404,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0.316379424718726,1.33441135746677,0,0.42793898803392,0.318203247925937,0,1.97859703341646,1.92175920815238,3.53437207037059,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0,0.565621727814851,0,0,0.66343897524122,0.438450885253763,1.15755106853338,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,1.78335525740625,0,0,0,0.379473173765715,1.04980416073495,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.797594390929008,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.365446585430928,0,0,0.264768380074501,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0.941063278792687,0,0,0.298509605773748,0,0,0,0,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0.955780602982214,0,0.465788870628778,0,0,0.521745061811734,0.150257608997218,1.14241563650639,0,0,0.322231671127465,0,0,0,0,0.336749488765919,0,0,1.28664954824955,0.260994291965212,0,0.694567422971502,0.244736704506468,1.79088841081487,0,0,0.176689145945881,0.964570191354574,0,0,0,0.911579868532147,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:118701892..118701903,+ | |short_description=p@chr9:118701892..118701903,+ | ||
}} | }} |
Latest revision as of 22:10, 31 July 2015
Short description: | p@chr9:118701892..118701903, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:118701892..118701903, + |
Coexpression cluster: | C679_Mesenchymal_Smooth_Cardiac_Hair_Fibroblast_Mesothelial_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 6.54e-20 | 3 |
smooth muscle cell of large intestine | 6.54e-20 | 3 |
smooth muscle cell of colon | 6.54e-20 | 3 |
hepatic stem cell | 4.27e-14 | 2 |
hepatic mesenchymal stem cell | 4.27e-14 | 2 |
skeletal muscle satellite cell | 1.98e-09 | 3 |
muscle cell | 9.70e-08 | 55 |
fibroblast of pulmonary artery | 9.71e-08 | 1 |
pigment cell (sensu Vertebrata) | 1.83e-07 | 1 |
iris pigment epithelial cell | 1.83e-07 | 1 |
muscle precursor cell | 2.90e-07 | 58 |
myoblast | 2.90e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.90e-07 | 58 |
fibroblast of the conjuctiva | 3.20e-07 | 1 |
electrically responsive cell | 7.77e-07 | 61 |
electrically active cell | 7.77e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 5.63e-09 | 11 |
iris epithelium | 1.83e-07 | 1 |
iris | 1.83e-07 | 1 |
placenta | 4.22e-07 | 4 |
allantois | 4.22e-07 | 4 |
colon | 6.05e-07 | 9 |