FFCP PHASE1:Hg19::chr9:16727880..16727894,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54796 | |EntrezGene=54796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30988 | |HGNC=30988 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=101bp_to_ENST00000468187_5end | |association_with_transcript=101bp_to_ENST00000468187_5end | ||
|cluster_id=chr9:16727880..16727894,- | |||
|description=CAGE_peak_10_at_BNC2_5end | |description=CAGE_peak_10_at_BNC2_5end | ||
|id=chr9:16727880..16727894,- | |id=chr9:16727880..16727894,- | ||
|ontology_enrichment_celltype=CL:0000055!1.34e-12!180;CL:0000393!7.24e-07!60;CL:0000211!7.24e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.34e-12!180;CL:0000393!7.24e-07!60;CL:0000211!7.24e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002549;1.45e-12;2!CL:0000540;3.00e-09;6!CL:0000404;3.00e-09;6!CL:0000511;1.31e-07;1!CL:0002625;1.31e-07;1!CL:0000216;1.31e-07;1!CL:0002566;4.08e-07;1!CL:0002570;4.75e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.54e-12,2;CL:0000540,4.11e-09,6;CL:0000031,4.11e-09,6;CL:0000404,4.11e-09,6;CL:0000511,1.36e-07,1;CL:0002625,1.36e-07,1;CL:0000216,1.36e-07,1;CL:0002566,4.34e-07,1;CL:0000047,6.00e-07,8;CL:0002570,7.09e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;3.00e-09;6!UBERON:0010115;1.09e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;4.08e-07;1!DOID:0070004;4.08e-07;1!DOID:2355;4.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.84e-07,1;DOID:4960,4.60e-07,1;DOID:0070004,4.60e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.45e-12;2!UBERON:0005358;1.45e-12;2!UBERON:0001886;1.45e-12;2!UBERON:0004086;1.45e-12;2!UBERON:0005282;1.45e-12;2!UBERON:0005281;1.45e-12;2!UBERON:0005284;5.31e-11;5!UBERON:0002363;1.09e-07;1!UBERON:0001136;1.31e-07;1!UBERON:0001343;1.31e-07;1!UBERON:0004910;1.31e-07;1!UBERON:0004813;1.31e-07;1!UBERON:0006834;1.74e-07;1!UBERON:0005795;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.54e-12,2;UBERON:0005358,1.54e-12,2;UBERON:0001886,1.54e-12,2;UBERON:0004086,1.54e-12,2;UBERON:0005282,1.54e-12,2;UBERON:0005281,1.54e-12,2;UBERON:0005284,6.55e-11,5;UBERON:0002363,1.12e-07,1;UBERON:0007645,1.12e-07,1;UBERON:0007647,1.12e-07,1;UBERON:0010115,1.12e-07,1;UBERON:0001136,1.36e-07,1;UBERON:0001343,1.36e-07,1;UBERON:0004910,1.36e-07,1;UBERON:0005154,1.36e-07,1;UBERON:0005295,1.36e-07,1;UBERON:0004813,1.36e-07,1;UBERON:0005297,1.36e-07,1;UBERON:0005294,1.36e-07,1;UBERON:0010141,1.36e-07,1;UBERON:0005891,1.36e-07,1;UBERON:0006834,1.63e-07,1 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.764134057479513,0.410502947249729,0.865818594450472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0.756278537312543,0,0.87834785693126,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,1.43418310374407,0,0,0,0,0.311211035399766,0.134710672069688,0,1.05950199351452,1.72852777344,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0.721367704669072,0.257640540045629,0.18611685633159,0,0.194874010322397,0.252433774244115,0.0920498986422993,0.646584227275248,0,0,0.169560592310488,0,0,0,0.609868530647977,0.530119073285941,0.232387885739037,0.10366105501537,0.252320850875628,1.45990943630332,0,0,0,0.928735856063958,0.721879481669586,0.354920400119532,0.337169380156203,0,0.441175890929576,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20645999155121,0.763976851116555,3.51652341630141,0,0.925447434329912,0.600686115687835,0.857479297891735,0.336393253036082,0.43596006883328,0.36669142910475,0.258543431515556,0,0,0,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0,1.49959486773086,0,0,0,0.239624855491583,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0.271265023699736,0.623912584592421,0,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.767309866440312,0.561320188866147,0.640695746278505,0.511707249066704,0.160853921143607,0,0,0.532685175939381,0.739144404124282,0,0.232420756919918,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,3.21367859688319,0.870036464629098,0.462145851343933,0.307007349452259,0.137836572484531,2.0409846524972,0.725083469571143,0.255679882248303,1.78064071293475,0,0,0,0,0.464845549297286,0,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,1.116475108079,0.949138274156178,0.190630193923825,0,0,0.636406495851874,0,0,0,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.424216295861138,0,2.2054613741845,0,0,0,1.9676842561399,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,0.633322905892992,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0.284136146806413,0,0,0,0,0,0.779160935160341,0,8.44501632511974,0,0,0,0,0.123084805461069,0,0.179736702294654,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,2.60437492399938,0,0,0,0,0,0,0.435753854075961,0,2.07765697960252,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.530745387020035,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,5.2444861091645,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.418411385249333,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.335917362433631,0,0,0,0,0,0,1.69346664131569,0,0,1.12527203925513,1.10031549277787,1.24632101408756,0,0,0,0,0.945668487590378,0.367182116944987,0,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,1.5334921960688,0.113312091520126,0,0,0.129282956361551,0,0.171086837884329,0,0.320362237703084,0.471612915298998,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0,0.909894705249887,0.570930667089935,0.235265819698172,0,0,0.895528817321244,1.16856654923612,1.10961172300523,0.378806010550178,0.754703705257725,0,0,0.151230923763239,0.466311601748341,0.295710299979268,0.318593534327405,0.449803112163605,0.931577741257556,0,0,0,0.300515217994437,0.761610424337591,0.406870733204662,0.545545977607678,0.429642228169954,0,0,0.400027764663154,0.343395705182793,1.01024846629776,0,0,0.857766365499703,0.260994291965212,0.453411851024545,0.694567422971502,0,0,0.926404341482917,0.657852148736121,0.706756583783524,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0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| ||
|short_description=p10@BNC2 | |short_description=p10@BNC2 | ||
}} | }} |
Latest revision as of 20:05, 16 September 2015
Short description: | p10@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BNC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 101bp_to_ENST00000468187_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.54e-12 | 2 |
neuron | 4.11e-09 | 6 |
neuroblast | 4.11e-09 | 6 |
electrically signaling cell | 4.11e-09 | 6 |
androgen binding protein secreting cell | 1.36e-07 | 1 |
seminiferous tubule epithelial cell | 1.36e-07 | 1 |
Sertoli cell | 1.36e-07 | 1 |
dark melanocyte | 4.34e-07 | 1 |
neuronal stem cell | 6.00e-07 | 8 |
mesenchymal stem cell of adipose | 7.09e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.54e-12 | 2 |
ventricle of nervous system | 1.54e-12 | 2 |
choroid plexus | 1.54e-12 | 2 |
brain ventricle | 1.54e-12 | 2 |
ventricular system of brain | 1.54e-12 | 2 |
ventricular system of central nervous system | 1.54e-12 | 2 |
brain vasculature | 6.55e-11 | 5 |
dura mater | 1.12e-07 | 1 |
future meninx | 1.12e-07 | 1 |
ectomeninx | 1.12e-07 | 1 |
future dura mater | 1.12e-07 | 1 |
mesothelium | 1.36e-07 | 1 |
seminiferous tubule of testis | 1.36e-07 | 1 |
epithelium of male gonad | 1.36e-07 | 1 |
epithelial cord | 1.36e-07 | 1 |
sex cord | 1.36e-07 | 1 |
seminiferous tubule epithelium | 1.36e-07 | 1 |
testis sex cord | 1.36e-07 | 1 |
genital ridge | 1.36e-07 | 1 |
primitive sex cord of indifferent gonad | 1.36e-07 | 1 |
coelomic epithelium | 1.36e-07 | 1 |
uterus or analog | 1.63e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.84e-07 | 1 |
bone marrow cancer | 4.60e-07 | 1 |
myeloma | 4.60e-07 | 1 |