FFCP PHASE1:Hg19::chr5:180708354..180708380,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000412295_5end | |association_with_transcript=0bp_to_ENST00000412295_5end | ||
|cluster_id=chr5:180708354..180708380,+ | |||
|description=CAGE_peak_1_at_ENST00000412295_5end | |description=CAGE_peak_1_at_ENST00000412295_5end | ||
|id=chr5:180708354..180708380,+ | |id=chr5:180708354..180708380,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.65e-11!5 | |ontology_enrichment_celltype=CL:0002322!4.65e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.61e-13;5!CL:0002321;6.37e-13;15!CL:0002541;6.01e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.61e-13,5;CL:0002541,6.82e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.51e-26!143;DOID:162!8.36e-23!235;DOID:14566!5.72e-22!239;DOID:305!1.97e-19!106;DOID:3095!3.40e-08!22;DOID:2994!3.40e-08!22;DOID:0050686!4.20e-08!137 | |ontology_enrichment_disease=DOID:0050687!1.51e-26!143;DOID:162!8.36e-23!235;DOID:14566!5.72e-22!239;DOID:305!1.97e-19!106;DOID:3095!3.40e-08!22;DOID:2994!3.40e-08!22;DOID:0050686!4.20e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:0050687;4.27e-09;143!DOID:3095;1.43e-08;22!DOID:2994;1.43e-08;22!DOID:0050615;1.89e-07;16!DOID:5409;4.58e-07;4!DOID:1325;7.82e-07;7!DOID:3904;7.82e-07;7!DOID:154;9.90e-07;2!DOID:4236;9.90e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.08e-21,143;DOID:162,5.41e-19,235;DOID:14566,2.53e-18,239;DOID:305,1.99e-13,106;DOID:0050686,9.47e-09,137;DOID:3095,1.46e-08,22;DOID:2994,1.46e-08,22;DOID:0050615,1.98e-07,16;DOID:5409,4.78e-07,4;DOID:1325,8.00e-07,7;DOID:3904,8.00e-07,7;DOID:154,9.90e-07,2;DOID:4236,9.90e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001264!3.60e-08!10;UBERON:0003922!3.60e-08!10;UBERON:0003923!3.60e-08!10;UBERON:0003924!3.60e-08!10;UBERON:0003921!3.60e-08!10;UBERON:0000949!3.65e-08!45;UBERON:0001045!2.43e-07!11;UBERON:0002075!8.53e-07!18 | |ontology_enrichment_uberon=UBERON:0001264!3.60e-08!10;UBERON:0003922!3.60e-08!10;UBERON:0003923!3.60e-08!10;UBERON:0003924!3.60e-08!10;UBERON:0003921!3.60e-08!10;UBERON:0000949!3.65e-08!45;UBERON:0001045!2.43e-07!11;UBERON:0002075!8.53e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;4.84e-10;10!UBERON:0003124;6.01e-08;3!UBERON:0000920;6.01e-08;3!UBERON:0002075;7.86e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,4.99e-10,10;UBERON:0000920,6.82e-08,3;UBERON:0002075,8.16e-07,18 | |||
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| ||
|short_description=p1@ENST00000412295 | |short_description=p1@ENST00000412295 | ||
}} | }} |
Latest revision as of 14:07, 30 July 2015
Short description: | p1@ENST00000412295 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000412295_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412295_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.61e-13 | 5 |
chorionic membrane mesenchymal stem cell | 6.82e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas | 4.99e-10 | 10 |
egg chorion | 6.82e-08 | 3 |
viscus | 8.16e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.08e-21 | 143 |
cancer | 5.41e-19 | 235 |
disease of cellular proliferation | 2.53e-18 | 239 |
carcinoma | 1.99e-13 | 106 |
organ system cancer | 9.47e-09 | 137 |
germ cell and embryonal cancer | 1.46e-08 | 22 |
germ cell cancer | 1.46e-08 | 22 |
respiratory system cancer | 1.98e-07 | 16 |
lung small cell carcinoma | 4.78e-07 | 4 |
bronchus cancer | 8.00e-07 | 7 |
bronchogenic carcinoma | 8.00e-07 | 7 |
mixed cell type cancer | 9.90e-07 | 2 |
carcinosarcoma | 9.90e-07 | 2 |