FFCP PHASE1:Hg19::chr5:66124481..66124523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:66124481..66124523,- | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr5:66124481..66124523,- | |description=CAGE_peak_at_chr5:66124481..66124523,- | ||
|id=chr5:66124481..66124523,- | |id=chr5:66124481..66124523,- | ||
|ontology_enrichment_celltype=CL:0002139!1.60e-14!24;CL:0000115!2.25e-12!35;CL:0000624!8.50e-11!6;CL:0000071!1.47e-09!18;CL:0002546!1.47e-09!18;CL:0002078!4.69e-09!44;CL:0000213!4.56e-07!57;CL:0000215!4.56e-07!57;CL:0005020!7.42e-07!6;CL:0002138!7.42e-07!6;CL:0005022!7.42e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.60e-14!24;CL:0000115!2.25e-12!35;CL:0000624!8.50e-11!6;CL:0000071!1.47e-09!18;CL:0002546!1.47e-09!18;CL:0002078!4.69e-09!44;CL:0000213!4.56e-07!57;CL:0000215!4.56e-07!57;CL:0005020!7.42e-07!6;CL:0002138!7.42e-07!6;CL:0005022!7.42e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002262;2.85e-10;2!CL:1000398;2.85e-10;2!CL:0000071;1.17e-09;18!CL:0002139;2.20e-07;24!CL:0000115;2.71e-07;36!CL:0002144;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,3.58e-10,2;CL:1000398,3.58e-10,2;CL:0000071,1.07e-09,18;CL:0002546,1.07e-09,18;CL:0000115,2.44e-08,36;CL:0002139,2.06e-07,24;CL:0002144,2.79e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.17e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.53e-12!69;UBERON:0002049!3.47e-11!79;UBERON:0007798!3.47e-11!79;UBERON:0001986!1.47e-09!18;UBERON:0004638!1.47e-09!18;UBERON:0004852!1.47e-09!18;UBERON:0001981!1.30e-08!60;UBERON:0007500!1.30e-08!60;UBERON:0004537!1.30e-08!60;UBERON:0006965!1.30e-08!60;UBERON:0000487!1.76e-07!22;UBERON:0004535!4.54e-07!110;UBERON:0001009!9.97e-07!113 | |ontology_enrichment_uberon=UBERON:0000055!1.53e-12!69;UBERON:0002049!3.47e-11!79;UBERON:0007798!3.47e-11!79;UBERON:0001986!1.47e-09!18;UBERON:0004638!1.47e-09!18;UBERON:0004852!1.47e-09!18;UBERON:0001981!1.30e-08!60;UBERON:0007500!1.30e-08!60;UBERON:0004537!1.30e-08!60;UBERON:0006965!1.30e-08!60;UBERON:0000487!1.76e-07!22;UBERON:0004535!4.54e-07!110;UBERON:0001009!9.97e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.85e-10;2!UBERON:0003497;2.85e-10;2!UBERON:0003909;2.85e-10;2!UBERON:0003835;2.85e-10;2!UBERON:0004638;1.17e-09;18!UBERON:0001986;1.17e-09;18!UBERON:0004852;1.17e-09;18!UBERON:0000487;5.26e-08;22!UBERON:0010523;2.88e-07;3!UBERON:0001915;2.88e-07;3!UBERON:0001280;2.88e-07;3!UBERON:0004647;2.88e-07;3!UBERON:0001982;2.88e-07;3!UBERON:0006914;4.14e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,3.58e-10,2;UBERON:0003497,3.58e-10,2;UBERON:0003909,3.58e-10,2;UBERON:0003835,3.58e-10,2;UBERON:0004638,1.07e-09,18;UBERON:0001986,1.07e-09,18;UBERON:0004852,1.07e-09,18;UBERON:0000487,4.89e-08,22;UBERON:0010523,2.79e-07,3;UBERON:0001915,2.79e-07,3;UBERON:0001982,2.79e-07,3;UBERON:0001280,3.35e-07,3;UBERON:0004647,3.35e-07,3;UBERON:0005171,3.35e-07,3;UBERON:0006914,3.88e-07,25 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.57204305099666,0.616804496998528,1.67186495390678,0.651844533267181,1.4203434172042,0,2.89667187901451,0.883817722424512,0.443067789167242,0.812411591295047,2.0494611156108,6.63302672555379,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,1.78886166630035,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,1.61131726843659,0,0.976248230192678,0.367663080345869,0,0,0,0.112611480483322,3.06633274931766,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,2.07720169014593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:66124481..66124523,- | |short_description=p@chr5:66124481..66124523,- | ||
}} | }} |
Latest revision as of 15:49, 30 July 2015
Short description: | p@chr5:66124481..66124523, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:66124481..66124523, - |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 3.58e-10 | 2 |
endothelial cell of hepatic sinusoid | 3.58e-10 | 2 |
blood vessel endothelial cell | 1.07e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.07e-09 | 18 |
endothelial cell | 2.44e-08 | 36 |
endothelial cell of vascular tree | 2.06e-07 | 24 |
capillary endothelial cell | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 3.58e-10 | 2 |
abdomen blood vessel | 3.58e-10 | 2 |
sinusoid | 3.58e-10 | 2 |
abdominal segment blood vessel | 3.58e-10 | 2 |
blood vessel endothelium | 1.07e-09 | 18 |
endothelium | 1.07e-09 | 18 |
cardiovascular system endothelium | 1.07e-09 | 18 |
simple squamous epithelium | 4.89e-08 | 22 |
microcirculatory vessel | 2.79e-07 | 3 |
endothelium of capillary | 2.79e-07 | 3 |
capillary | 2.79e-07 | 3 |
liver parenchyma | 3.35e-07 | 3 |
liver lobule | 3.35e-07 | 3 |
hepatic duct | 3.35e-07 | 3 |
squamous epithelium | 3.88e-07 | 25 |