FFCP PHASE1:Hg19::chr5:73088486..73088490,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:73088486..73088490,+ | |||
|description=CAGE_peak_at_chr5:73088486..73088490,+ | |description=CAGE_peak_at_chr5:73088486..73088490,+ | ||
|id=chr5:73088486..73088490,+ | |id=chr5:73088486..73088490,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.08e-10!254;CL:0005020!8.90e-07!6;CL:0002138!8.90e-07!6;CL:0005022!8.90e-07!6 | |ontology_enrichment_celltype=CL:0000066!5.08e-10!254;CL:0005020!8.90e-07!6;CL:0002138!8.90e-07!6;CL:0005022!8.90e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002138;3.27e-14;6!CL:0002139;8.39e-10;24!CL:0002621;1.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.53e-14,6;CL:0002138,2.53e-14,6;CL:0005022,2.53e-14,6;CL:0002139,7.68e-10,24;CL:0002621,1.59e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;7.65e-16;5!CL:0005022;3.27e-14;6 | |||
|ontology_enrichment_disease=DOID:305!1.48e-09!106;DOID:0050687!1.48e-08!143 | |ontology_enrichment_disease=DOID:305!1.48e-09!106;DOID:0050687!1.48e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.51e-11!155;UBERON:0001555!4.51e-11!155;UBERON:0007026!4.51e-11!155;UBERON:0004119!8.76e-11!169;UBERON:0000925!8.76e-11!169;UBERON:0006595!8.76e-11!169;UBERON:0000161!9.48e-10!35;UBERON:0000477!1.88e-08!286;UBERON:0004111!2.32e-08!241;UBERON:0005911!3.07e-07!82;UBERON:0000165!8.04e-07!28;UBERON:0000930!8.04e-07!28 | |ontology_enrichment_uberon=UBERON:0001007!4.51e-11!155;UBERON:0001555!4.51e-11!155;UBERON:0007026!4.51e-11!155;UBERON:0004119!8.76e-11!169;UBERON:0000925!8.76e-11!169;UBERON:0006595!8.76e-11!169;UBERON:0000161!9.48e-10!35;UBERON:0000477!1.88e-08!286;UBERON:0004111!2.32e-08!241;UBERON:0005911!3.07e-07!82;UBERON:0000165!8.04e-07!28;UBERON:0000930!8.04e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;7.65e-16;5!UBERON:0001473;1.12e-10;8!UBERON:0004536;1.12e-10;8!UBERON:0006558;1.12e-10;8!UBERON:0001828;5.97e-10;8!UBERON:0002465;1.51e-08;10!UBERON:0001949;1.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.20e-15,5;UBERON:0004117,2.20e-15,5;UBERON:0007689,2.20e-15,5;UBERON:0007123,2.20e-15,5;UBERON:0003091,2.20e-15,5;UBERON:0001473,9.27e-11,8;UBERON:0004536,9.27e-11,8;UBERON:0006558,9.27e-11,8;UBERON:0001828,7.80e-10,8;UBERON:0002465,1.30e-08,10;UBERON:0001949,1.59e-07,3;UBERON:0009722,4.65e-07,11;UBERON:0007690,4.65e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.410502947249729,0.550975469195755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.472674085820339,0,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,3.10100111003195,4.62496141492723,4.68608857870538,2.01414658554573,0,0.732186172644509,2.20597848207521,0,2.41109266367015,0.22452937262617,0.563057402416611,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.926864265692532,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.809364721840658,0.280901613404497,1.02077085627447,0.491337269247072,0.206651562351531,1.18800285728205,0,0,0,0.505008341862199,0.250237039743928,0.554128230968366,0.438977620880838,0,0,0,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0.773043412653187,1.36373060295417,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0.502644862058154,0.0925884451585296,0,0,0,0,0,0.721832238805369,0.925971025153221,1.52203321787679,0,0,0,0,0,0,0.16798212819886,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.831883446123229,0.892144943985809,0.788512075169673,0.35142424497814,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,1.00253235151642,0.552485933615378,0.114814448164607,0.364182336013434,0.393373244878272,0,0.231046011313244,0,0,0.422206515571503,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0,0.330569830721956,0,2.04180339991335,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37402137902306,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0.284136146806413,0,0,0,0.994147647766298,0.422008249231538,1.11308705022906,0,0.211125408127993,0.996239941255349,0.276283915531148,0.503865495708552,0.306806047506464,0,0,1.88723537409386,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0.724999575434793,0.227586896570999,0.254253650292766,0,1.03423011972439,0.291604613383254,0,0,0,1.52581736317083,0,0.295547618953547,0.219385397153973,0,0.83654246567162,0,0.341826167541004,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0.782658475728359,0.242780379534093,0.394584402849391,0,0,0.126373159256976,0,0.103688191397247,0.664653872707185,0,0,1.19472429772959,0.284609546029793,0,0.173559738335131,0.391969589657511,0.435296032902013,0.698906672968121,0.171986032471617,0.0967563312890851,0,0.164230914106418,0.193978032976839,0.176512253383001,0,0.411125773940253,0,0.379864775735272,0,0.400794101257669,0.85381197895741,0.19980960958213,0.144090417154106,0.229073192331831,0.343189995723929,0.14405479798815,1.11827282008889,0.235694034616795,0.135904206073614,0.104602846312333,0.713987523454252,0,0,0,0,0.859530882839914,0,0,0.687481272035051,0.717873024576814,0.199679000498991,0,0,0.134366944973453,0.720599767084807,0,0.630265458457789,0.164831716762333,0.26961417541674,0.78741985211799,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0.335434687599266,0,0.104909176269996,0.105600336519406,0.179287339332845,2.49489756515279,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0.258565912723101,0.13223260174269,0.513260513652988,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0.2506898940227,0,0,0,0.886068179966986,0.366078794705889,0.1251909307065,0.573409195690071,0,0.124192805882767,0.138348634936231,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0.318593534327405,0.449803112163605,0,0.829412415681711,0,1.04349012362347,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0,0.398095888698616,1.20008329398946,0,0,0,0.57785949122191,0,0.260994291965212,0,0.231522474323834,0.244736704506468,1.25362188757041,0,0.219284049578707,0.176689145945881,0.964570191354574,0.3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| ||
|short_description=p@chr5:73088486..73088490,+ | |short_description=p@chr5:73088486..73088490,+ | ||
}} | }} |
Latest revision as of 16:15, 30 July 2015
Short description: | p@chr5:73088486..73088490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:73088486..73088490, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.53e-14 | 6 |
endothelial cell of lymphatic vessel | 2.53e-14 | 6 |
vascular lymphangioblast | 2.53e-14 | 6 |
endothelial cell of vascular tree | 7.68e-10 | 24 |
gingival epithelial cell | 1.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.20e-15 | 5 |
pharyngeal pouch | 2.20e-15 | 5 |
thyroid diverticulum | 2.20e-15 | 5 |
pharyngeal pouch 2 | 2.20e-15 | 5 |
thyroid primordium | 2.20e-15 | 5 |
lymphatic vessel | 9.27e-11 | 8 |
lymph vasculature | 9.27e-11 | 8 |
lymphatic part of lymphoid system | 9.27e-11 | 8 |
gingiva | 7.80e-10 | 8 |
lymphoid system | 1.30e-08 | 10 |
gingival epithelium | 1.59e-07 | 3 |
entire pharyngeal arch endoderm | 4.65e-07 | 11 |
early pharyngeal endoderm | 4.65e-07 | 11 |