FFCP PHASE1:Hg19::chr7:105241331..105241343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34531 | |HGNC=34531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000490493_5end | |association_with_transcript=-9bp_to_ENST00000490493_5end | ||
|cluster_id=chr7:105241331..105241343,- | |||
|coexpression_cluster_id=C535 | |||
|description=CAGE_peak_2_at_EFCAB10_5end | |description=CAGE_peak_2_at_EFCAB10_5end | ||
|id=chr7:105241331..105241343,- | |id=chr7:105241331..105241343,- | ||
|ontology_enrichment_celltype=CL:0002336!4.33e-10!1;CL:0002261!4.33e-10!1;CL:0002170!4.33e-10!1;CL:0002322!4.37e-08!5 | |ontology_enrichment_celltype=CL:0002336!4.33e-10!1;CL:0002261!4.33e-10!1;CL:0002170!4.33e-10!1;CL:0002322!4.37e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.02e-07;15!CL:0000125;1.02e-07;15!CL:0000095;5.34e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.02e-07,15;CL:0000125,1.02e-07,15;CL:0000030,1.02e-07,15;CL:0000339,1.02e-07,15;CL:0000095,5.34e-07,17;CL:0000123,5.34e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.07e-11;10!UBERON:0003056;7.07e-11;3!CL:0000339;1.02e-07;15 | |||
|ontology_enrichment_disease=DOID:1036!6.43e-19!8;DOID:3093!1.66e-07!11;DOID:8692!2.25e-07!31 | |ontology_enrichment_disease=DOID:1036!6.43e-19!8;DOID:3093!1.66e-07!11;DOID:8692!2.25e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;3.32e-56;8!DOID:8692;1.72e-15;31!DOID:1240;1.65e-12;39!DOID:3093;1.53e-10;11!DOID:5409;1.96e-08;4!DOID:2531;5.36e-08;51!DOID:0060083;5.36e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.32e-56,8;DOID:8692,5.20e-15,31;DOID:1240,4.84e-12,39;DOID:3093,1.53e-10,11;DOID:0050686,2.97e-10,137;DOID:2531,2.54e-09,51;DOID:0060083,2.54e-09,51;DOID:5409,1.96e-08,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.93e-07;5!UBERON:0005388;4.93e-07;5!UBERON:0001802;4.93e-07;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@EFCAB10 | |short_description=p2@EFCAB10 | ||
}} | }} |
Latest revision as of 21:42, 24 September 2015
Short description: | p2@EFCAB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFCAB10_5end |
Coexpression cluster: | C535_medulloblastoma_small_pineal_retinoblastoma_eye_Retinal_retina |
Association with transcript: | -9bp_to_ENST00000490493_5end |
EntrezGene: | NA |
HGNC: | 34531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.02e-07 | 15 |
glial cell | 1.02e-07 | 15 |
glioblast | 1.02e-07 | 15 |
glioblast (sensu Vertebrata) | 1.02e-07 | 15 |
neuron associated cell | 5.34e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.32e-56 | 8 |
myeloid leukemia | 5.20e-15 | 31 |
leukemia | 4.84e-12 | 39 |
nervous system cancer | 1.53e-10 | 11 |
organ system cancer | 2.97e-10 | 137 |
hematologic cancer | 2.54e-09 | 51 |
immune system cancer | 2.54e-09 | 51 |
lung small cell carcinoma | 1.96e-08 | 4 |