FFCP PHASE1:Hg19::chr7:115723897..115723915,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:115723897..115723915,- | |||
|coexpression_cluster_id=C1022 | |||
|description=CAGE_peak_at_chr7:115723897..115723915,- | |description=CAGE_peak_at_chr7:115723897..115723915,- | ||
|id=chr7:115723897..115723915,- | |id=chr7:115723897..115723915,- | ||
|ontology_enrichment_celltype=CL:0000064!2.43e-60!3;CL:0005012!2.43e-60!3;CL:0000067!2.43e-60!3;CL:0002304!2.43e-60!3;CL:0000342!1.88e-21!1;CL:0002565!1.88e-21!1;CL:0000075!2.96e-12!27;CL:0000710!1.11e-09!20;CL:0000068!6.34e-08!3;CL:0000069!6.34e-08!3;CL:0000307!6.34e-08!3;CL:0000377!6.34e-08!3 | |ontology_enrichment_celltype=CL:0000064!2.43e-60!3;CL:0005012!2.43e-60!3;CL:0000067!2.43e-60!3;CL:0002304!2.43e-60!3;CL:0000342!1.88e-21!1;CL:0002565!1.88e-21!1;CL:0000075!2.96e-12!27;CL:0000710!1.11e-09!20;CL:0000068!6.34e-08!3;CL:0000069!6.34e-08!3;CL:0000307!6.34e-08!3;CL:0000377!6.34e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.83e-66;3!CL:0000067;2.83e-66;3!CL:0005012;2.83e-66;3!CL:0002304;2.83e-66;3!CL:0000342;2.42e-50;1!CL:0002565;2.42e-50;1!CL:0000075;2.34e-17;27!CL:0000306;1.21e-13;4!CL:0002222;1.21e-13;4!CL:0002224;1.21e-13;4!CL:0000710;5.56e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.40e-66,3;CL:0000067,2.40e-66,3;CL:0005012,2.40e-66,3;CL:0002304,2.40e-66,3;CL:0000342,2.42e-50,1;CL:0002565,2.42e-50,1;CL:0000075,2.34e-17,27;CL:0000306,1.29e-13,4;CL:0002222,1.29e-13,4;CL:0002224,1.29e-13,4;CL:0000710,5.42e-11,20;CL:0002077,6.95e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:12603!7.72e-21!1 | |ontology_enrichment_disease=DOID:12603!7.72e-21!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000488;1.08e-110;4!UBERON:0002203;2.92e-74;6!UBERON:0001768;2.92e-74;6!UBERON:0002200;2.92e-74;6!UBERON:0007625;6.65e-72;11!UBERON:0001778;2.83e-66;3!UBERON:0001775;2.83e-66;3!UBERON:0001801;9.12e-57;14!UBERON:0002506;2.42e-50;1!UBERON:0001769;2.42e-50;1!UBERON:0000019;3.83e-42;19!UBERON:0000047;3.83e-42;19!UBERON:0004088;3.83e-42;19!UBERON:0010230;3.83e-42;19!UBERON:0006876;4.36e-41;11!UBERON:0000970;4.28e-40;20!UBERON:0002104;3.06e-38;21!UBERON:0001456;3.06e-38;21!UBERON:0000020;5.16e-35;23!UBERON:0001032;1.33e-33;24!UBERON:0004456;1.33e-33;24!UBERON:0010371;5.77e-26;31!UBERON:0010077;1.21e-13;4!UBERON:0005389;1.21e-13;4!UBERON:0000484;1.21e-13;4!UBERON:0000965;1.21e-13;4!UBERON:0001803;1.21e-13;4!UBERON:0001444;6.77e-11;48!UBERON:0000033;9.04e-10;50!UBERON:0007811;1.03e-09;52!UBERON:0000153;4.06e-09;54 | |||
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|short_description=p@chr7:115723897..115723915,- | |short_description=p@chr7:115723897..115723915,- | ||
}} | }} |
Latest revision as of 05:12, 31 July 2015
Short description: | p@chr7:115723897..115723915, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:115723897..115723915, - |
Coexpression cluster: | C1022_Ciliary_Lens_Astrocyte_Neural_Iris_retina_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.40e-66 | 3 |
ciliated epithelial cell | 2.40e-66 | 3 |
multi-ciliated epithelial cell | 2.40e-66 | 3 |
non-pigmented ciliary epithelial cell | 2.40e-66 | 3 |
pigment cell (sensu Vertebrata) | 2.42e-50 | 1 |
iris pigment epithelial cell | 2.42e-50 | 1 |
columnar/cuboidal epithelial cell | 2.34e-17 | 27 |
crystallin accumulating cell | 1.29e-13 | 4 |
vertebrate lens cell | 1.29e-13 | 4 |
lens epithelial cell | 1.29e-13 | 4 |
neurecto-epithelial cell | 5.42e-11 | 20 |
ecto-epithelial cell | 6.95e-07 | 34 |