FFCP PHASE1:Hg19::chr7:155302629..155302646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:155302629..155302646,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr7:155302629..155302646,- | |description=CAGE_peak_at_chr7:155302629..155302646,- | ||
|id=chr7:155302629..155302646,- | |id=chr7:155302629..155302646,- | ||
|ontology_enrichment_celltype=CL:0000128!3.09e-17!7;CL:0000126!3.09e-17!7;CL:0000127!3.09e-17!7;CL:0002453!3.09e-17!7;CL:0002603!2.67e-15!3;CL:0000095!4.87e-15!17;CL:0000123!4.87e-15!17;CL:0000242!6.88e-11!2;CL:0002319!3.35e-10!25;CL:0000243!1.31e-09!15;CL:0000125!1.31e-09!15;CL:0000030!1.31e-09!15;CL:0000339!1.31e-09!15 | |ontology_enrichment_celltype=CL:0000128!3.09e-17!7;CL:0000126!3.09e-17!7;CL:0000127!3.09e-17!7;CL:0002453!3.09e-17!7;CL:0002603!2.67e-15!3;CL:0000095!4.87e-15!17;CL:0000123!4.87e-15!17;CL:0000242!6.88e-11!2;CL:0002319!3.35e-10!25;CL:0000243!1.31e-09!15;CL:0000125!1.31e-09!15;CL:0000030!1.31e-09!15;CL:0000339!1.31e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.52e-10;7!CL:0000126;2.52e-10;7!CL:0000127;2.52e-10;7!CL:0000123;1.12e-09;2!CL:0000242;1.12e-09;2!CL:0002253;1.78e-09;2!CL:0000095;2.01e-08;17!CL:0002603;8.62e-07;3!CL:0002178;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.35e-10,7;CL:0000126,2.35e-10,7;CL:0000127,2.35e-10,7;CL:0002453,2.35e-10,7;CL:0000242,1.12e-09,2;CL:0002253,1.71e-09,2;CL:0000095,1.93e-08,17;CL:0000123,1.93e-08,17;CL:0002603,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.29e-51;3 | |||
|ontology_enrichment_disease=DOID:1909!3.84e-10!2 | |ontology_enrichment_disease=DOID:1909!3.84e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:3119;3.90e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.09e-19,14 | |||
|ontology_enrichment_uberon=UBERON:0002680!2.29e-33!9;UBERON:0001895!2.29e-33!9;UBERON:0010092!2.29e-33!9;UBERON:0004733!2.92e-31!12;UBERON:0002028!2.92e-31!12;UBERON:0007277!2.92e-31!12;UBERON:0002037!1.28e-29!6;UBERON:0006215!1.28e-29!6;UBERON:0004732!9.86e-29!13;UBERON:0003076!1.10e-24!15;UBERON:0003057!1.10e-24!15;UBERON:0003135!1.95e-14!11;UBERON:0000473!3.76e-14!8;UBERON:0000955!2.27e-13!69;UBERON:0006238!2.27e-13!69;UBERON:0001049!4.93e-11!57;UBERON:0005068!4.93e-11!57;UBERON:0006241!4.93e-11!57;UBERON:0007135!4.93e-11!57;UBERON:0001017!9.28e-11!82;UBERON:0002616!1.41e-10!59;UBERON:0005743!4.11e-10!86;UBERON:0000073!7.40e-09!94;UBERON:0001016!7.40e-09!94;UBERON:0003075!1.30e-07!86;UBERON:0007284!1.30e-07!86;UBERON:0002346!3.72e-07!90;UBERON:0000033!4.61e-07!123;UBERON:0003101!6.24e-07!22;UBERON:0000079!6.24e-07!22;UBERON:0000988!7.76e-07!3 | |ontology_enrichment_uberon=UBERON:0002680!2.29e-33!9;UBERON:0001895!2.29e-33!9;UBERON:0010092!2.29e-33!9;UBERON:0004733!2.92e-31!12;UBERON:0002028!2.92e-31!12;UBERON:0007277!2.92e-31!12;UBERON:0002037!1.28e-29!6;UBERON:0006215!1.28e-29!6;UBERON:0004732!9.86e-29!13;UBERON:0003076!1.10e-24!15;UBERON:0003057!1.10e-24!15;UBERON:0003135!1.95e-14!11;UBERON:0000473!3.76e-14!8;UBERON:0000955!2.27e-13!69;UBERON:0006238!2.27e-13!69;UBERON:0001049!4.93e-11!57;UBERON:0005068!4.93e-11!57;UBERON:0006241!4.93e-11!57;UBERON:0007135!4.93e-11!57;UBERON:0001017!9.28e-11!82;UBERON:0002616!1.41e-10!59;UBERON:0005743!4.11e-10!86;UBERON:0000073!7.40e-09!94;UBERON:0001016!7.40e-09!94;UBERON:0003075!1.30e-07!86;UBERON:0007284!1.30e-07!86;UBERON:0002346!3.72e-07!90;UBERON:0000033!4.61e-07!123;UBERON:0003101!6.24e-07!22;UBERON:0000079!6.24e-07!22;UBERON:0000988!7.76e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.80e-45;6!UBERON:0002680;4.89e-30;9!UBERON:0001895;4.89e-30;9!UBERON:0004733;1.20e-22;12!UBERON:0002028;1.20e-22;12!UBERON:0004732;6.13e-21;13!UBERON:0000945;4.11e-14;5!UBERON:0010039;4.11e-14;5!UBERON:0005409;5.14e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.32e-45,6;UBERON:0006215,8.32e-45,6;UBERON:0002680,4.71e-30,9;UBERON:0001895,4.71e-30,9;UBERON:0010092,4.71e-30,9;UBERON:0004733,1.17e-22,12;UBERON:0002028,1.17e-22,12;UBERON:0007277,1.17e-22,12;UBERON:0004732,5.97e-21,13;UBERON:0003076,3.26e-18,15;UBERON:0003057,3.26e-18,15;UBERON:0000945,3.70e-09,8;UBERON:0010039,3.70e-09,8 | |||
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|short_description=p@chr7:155302629..155302646,- | |short_description=p@chr7:155302629..155302646,- | ||
}} | }} |
Latest revision as of 07:56, 31 July 2015
Short description: | p@chr7:155302629..155302646, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:155302629..155302646, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.35e-10 | 7 |
macroglial cell | 2.35e-10 | 7 |
astrocyte | 2.35e-10 | 7 |
oligodendrocyte precursor cell | 2.35e-10 | 7 |
Merkel cell | 1.12e-09 | 2 |
epithelial cell of large intestine | 1.71e-09 | 2 |
neuron associated cell | 1.93e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.93e-08 | 17 |
astrocyte of the cerebellum | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.32e-45 | 6 |
rhombic lip | 8.32e-45 | 6 |
regional part of metencephalon | 4.71e-30 | 9 |
metencephalon | 4.71e-30 | 9 |
future metencephalon | 4.71e-30 | 9 |
segmental subdivision of hindbrain | 1.17e-22 | 12 |
hindbrain | 1.17e-22 | 12 |
presumptive hindbrain | 1.17e-22 | 12 |
segmental subdivision of nervous system | 5.97e-21 | 13 |
posterior neural tube | 3.26e-18 | 15 |
chordal neural plate | 3.26e-18 | 15 |
stomach | 3.70e-09 | 8 |
food storage organ | 3.70e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.09e-19 | 14 |