FFCP PHASE1:Hg19::chr16:71417294..71417313,+: Difference between revisions
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|id=chr16:71417294..71417313,+
|short_description=p@chr16:71417294..71417313,+
|description=CAGE_peak_at_chr16:71417294..71417313,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:71417294..71417313,+ | |||
|coexpression_cluster_id=C2386 | |||
|description=CAGE_peak_at_chr16:71417294..71417313,+ | |||
|id=chr16:71417294..71417313,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.64e-11!5;CL:0000457!1.64e-11!5;CL:0002191!1.64e-11!5;CL:0000097!1.64e-11!5;CL:0000831!1.64e-11!5;CL:0002028!1.64e-11!5;CL:0000163!1.28e-08!9;CL:0000077!1.33e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.66e-29;5!CL:0000163;4.84e-25;9!CL:0000077;3.87e-12;19!CL:0002149;3.54e-07;6!CL:0002255;3.54e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.66e-29,5;CL:0002028,1.66e-29,5;CL:0000163,4.50e-25,9;CL:0000077,4.41e-12,19;CL:0002149,3.44e-07,6;CL:0002255,3.44e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.06e-15!14;DOID:120!3.62e-10!27;DOID:193!3.07e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:120;2.57e-08;27!DOID:193;9.91e-08;29!DOID:3001;3.54e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:120,2.62e-08,27;DOID:193,1.01e-07,29;DOID:3001,3.44e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000992!4.84e-11!13;UBERON:0002118!1.57e-10!5;UBERON:0004532!1.57e-10!5;UBERON:0001049!2.15e-10!57;UBERON:0005068!2.15e-10!57;UBERON:0006241!2.15e-10!57;UBERON:0007135!2.15e-10!57;UBERON:0001017!2.24e-10!82;UBERON:0003076!1.30e-09!15;UBERON:0003057!1.30e-09!15;UBERON:0005743!1.39e-09!86;UBERON:0000073!8.85e-09!94;UBERON:0001016!8.85e-09!94;UBERON:0004176!1.76e-08!22;UBERON:0002680!3.93e-08!9;UBERON:0001895!3.93e-08!9;UBERON:0010092!3.93e-08!9;UBERON:0002619!8.48e-08!22;UBERON:0002616!8.78e-08!59;UBERON:0004733!1.14e-07!12;UBERON:0002028!1.14e-07!12;UBERON:0007277!1.14e-07!12;UBERON:0000991!1.59e-07!21;UBERON:0009196!1.59e-07!21;UBERON:0009117!1.59e-07!21;UBERON:0005564!1.59e-07!21;UBERON:0002020!1.67e-07!34;UBERON:0003528!1.67e-07!34;UBERON:0003075!2.05e-07!86;UBERON:0007284!2.05e-07!86;UBERON:0000988!4.15e-07!3;UBERON:0001950!4.47e-07!20;UBERON:0004732!5.49e-07!13;UBERON:0002346!7.87e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;6.96e-13;3!UBERON:0002680;1.21e-09;9!UBERON:0001895;1.21e-09;9!UBERON:0002118;4.37e-08;5!UBERON:0004733;2.37e-07;12!UBERON:0002028;2.37e-07;12!UBERON:0002298;7.08e-07;6!UBERON:0004732;8.03e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,8.35e-13,3;UBERON:0002680,1.37e-09,9;UBERON:0001895,1.37e-09,9;UBERON:0010092,1.37e-09,9;UBERON:0002118,3.78e-08,5;UBERON:0004733,2.58e-07,12;UBERON:0002028,2.58e-07,12;UBERON:0007277,2.58e-07,12;UBERON:0002298,7.75e-07,6;UBERON:0004732,8.71e-07,13 | |||
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| ||
|short_description=p@chr16:71417294..71417313,+ | |||
}} | }} |
Latest revision as of 12:04, 25 July 2015
Short description: | p@chr16:71417294..71417313, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:71417294..71417313, + |
Coexpression cluster: | C2386_mesothelioma_Mast_pons_mature_endometrial_Mesothelial_medulla |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.66e-29 | 5 |
basophil mast progenitor cell | 1.66e-29 | 5 |
endocrine cell | 4.50e-25 | 9 |
mesothelial cell | 4.41e-12 | 19 |
epithelial cell of uterus | 3.44e-07 | 6 |
stromal cell of endometrium | 3.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pons | 8.35e-13 | 3 |
regional part of metencephalon | 1.37e-09 | 9 |
metencephalon | 1.37e-09 | 9 |
future metencephalon | 1.37e-09 | 9 |
right ovary | 3.78e-08 | 5 |
segmental subdivision of hindbrain | 2.58e-07 | 12 |
hindbrain | 2.58e-07 | 12 |
presumptive hindbrain | 2.58e-07 | 12 |
brainstem | 7.75e-07 | 6 |
segmental subdivision of nervous system | 8.71e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 2.62e-08 | 27 |
reproductive organ cancer | 1.01e-07 | 29 |
female reproductive endometrioid cancer | 3.44e-07 | 6 |