FFCP PHASE1:Hg19::chr10:118084968..118084984,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:118084968..118084984,+ | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr10:118084968..118084984,+ | |description=CAGE_peak_at_chr10:118084968..118084984,+ | ||
|id=chr10:118084968..118084984,+ | |id=chr10:118084968..118084984,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.82e-65!5;CL:0000039!1.05e-30!7;CL:0000586!1.05e-30!7;CL:0000540!6.37e-21!6;CL:0000031!6.37e-21!6;CL:0000404!6.37e-21!6;CL:0000047!7.36e-16!8;CL:0000148!2.05e-12!10;CL:0000541!2.05e-12!10;CL:0000147!4.95e-09!14;CL:0000133!1.47e-07!59 | |ontology_enrichment_celltype=CL:0002322!1.82e-65!5;CL:0000039!1.05e-30!7;CL:0000586!1.05e-30!7;CL:0000540!6.37e-21!6;CL:0000031!6.37e-21!6;CL:0000404!6.37e-21!6;CL:0000047!7.36e-16!8;CL:0000148!2.05e-12!10;CL:0000541!2.05e-12!10;CL:0000147!4.95e-09!14;CL:0000133!1.47e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.06e-75;5!CL:0000039;4.36e-35;7!CL:0000586;4.36e-35;7!CL:0002321;2.91e-25;15!CL:0000540;6.70e-24;6!CL:0000404;6.70e-24;6!CL:0000148;3.35e-14;10!CL:0000147;2.54e-10;14!CL:0000710;2.17e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.86e-75,5;CL:0000039,3.66e-35,7;CL:0000586,3.66e-35,7;CL:0000540,6.70e-24,6;CL:0000031,6.70e-24,6;CL:0000404,6.70e-24,6;CL:0000047,4.18e-18,8;CL:0000148,3.67e-14,10;CL:0000541,3.67e-14,10;CL:0000147,2.71e-10,14;CL:0000133,8.58e-09,59;CL:0000710,2.26e-07,20;CL:0000221,3.39e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.05e-24;10!UBERON:0005564;1.05e-24;10!CL:0000031;6.70e-24;6 | |||
|ontology_enrichment_disease=DOID:3095!4.65e-15!22;DOID:2994!4.65e-15!22 | |ontology_enrichment_disease=DOID:3095!4.65e-15!22;DOID:2994!4.65e-15!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.98e-11;22!DOID:2994;1.98e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.88e-11,22;DOID:2994,1.88e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.37e-27!8;UBERON:0003135!1.09e-19!11;UBERON:0000991!1.87e-10!21;UBERON:0009196!1.87e-10!21;UBERON:0009117!1.87e-10!21;UBERON:0005564!1.87e-10!21;UBERON:0004176!5.44e-10!22;UBERON:0003101!5.44e-10!22;UBERON:0000079!5.44e-10!22 | |ontology_enrichment_uberon=UBERON:0000473!6.37e-27!8;UBERON:0003135!1.09e-19!11;UBERON:0000991!1.87e-10!21;UBERON:0009196!1.87e-10!21;UBERON:0009117!1.87e-10!21;UBERON:0005564!1.87e-10!21;UBERON:0004176!5.44e-10!22;UBERON:0003101!5.44e-10!22;UBERON:0000079!5.44e-10!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.15e-31;8!UBERON:0003135;1.68e-22;11!UBERON:0000922;2.95e-15;49!UBERON:0000991;5.85e-12;21!UBERON:0003101;1.98e-11;22!UBERON:0000079;1.98e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.85e-31,8;UBERON:0003135,1.50e-22,11;UBERON:0000991,5.53e-12,21;UBERON:0009196,5.53e-12,21;UBERON:0009117,5.53e-12,21;UBERON:0005564,5.53e-12,21;UBERON:0004176,1.88e-11,22;UBERON:0003101,1.88e-11,22;UBERON:0000079,1.88e-11,22 | |||
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|short_description=p@chr10:118084968..118084984,+ | |short_description=p@chr10:118084968..118084984,+ | ||
}} | }} |
Latest revision as of 10:45, 23 July 2015
Short description: | p@chr10:118084968..118084984, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:118084968..118084984, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.86e-75 | 5 |
germ line cell | 3.66e-35 | 7 |
germ cell | 3.66e-35 | 7 |
neuron | 6.70e-24 | 6 |
neuroblast | 6.70e-24 | 6 |
electrically signaling cell | 6.70e-24 | 6 |
neuronal stem cell | 4.18e-18 | 8 |
melanocyte | 3.67e-14 | 10 |
melanoblast | 3.67e-14 | 10 |
pigment cell | 2.71e-10 | 14 |
neurectodermal cell | 8.58e-09 | 59 |
neurecto-epithelial cell | 2.26e-07 | 20 |
ectodermal cell | 3.39e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 7.85e-31 | 8 |
male reproductive organ | 1.50e-22 | 11 |
gonad | 5.53e-12 | 21 |
indifferent external genitalia | 5.53e-12 | 21 |
indifferent gonad | 5.53e-12 | 21 |
gonad primordium | 5.53e-12 | 21 |
external genitalia | 1.88e-11 | 22 |
male organism | 1.88e-11 | 22 |
male reproductive system | 1.88e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.88e-11 | 22 |
germ cell cancer | 1.88e-11 | 22 |