FFCP PHASE1:Hg19::chr8:22844948..22844964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23221 | |EntrezGene=23221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18756 | |HGNC=18756 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | |UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | ||
|association_with_transcript=18bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | |association_with_transcript=18bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | ||
|cluster_id=chr8:22844948..22844964,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_17_at_RHOBTB2_5end | |description=CAGE_peak_17_at_RHOBTB2_5end | ||
|id=chr8:22844948..22844964,+ | |id=chr8:22844948..22844964,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.63e-11!7;CL:0000586!3.63e-11!7;CL:0002541!1.22e-07!3 | |ontology_enrichment_celltype=CL:0000039!3.63e-11!7;CL:0000586!3.63e-11!7;CL:0002541!1.22e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;8.34e-18;2!CL:0002253;1.17e-17;2!CL:0002541;3.06e-12;3!CL:0002563;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,9.07e-18,2;CL:0002253,1.07e-17,2;CL:0002541,3.24e-12,3;CL:0002563,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.27e-34;1!UBERON:0007297;8.34e-18;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!4.82e-11!11;UBERON:0000473!5.83e-10!8;UBERON:0003101!6.21e-10!22;UBERON:0000079!6.21e-10!22;UBERON:0005631!1.87e-08!14;UBERON:0000158!1.87e-08!14;UBERON:0006947!8.27e-08!3;UBERON:0004054!8.27e-08!3;UBERON:0000476!1.22e-07!3;UBERON:0000920!1.22e-07!3;UBERON:0003124!7.93e-07!7 | |ontology_enrichment_uberon=UBERON:0003135!4.82e-11!11;UBERON:0000473!5.83e-10!8;UBERON:0003101!6.21e-10!22;UBERON:0000079!6.21e-10!22;UBERON:0005631!1.87e-08!14;UBERON:0000158!1.87e-08!14;UBERON:0006947!8.27e-08!3;UBERON:0004054!8.27e-08!3;UBERON:0000476!1.22e-07!3;UBERON:0000920!1.22e-07!3;UBERON:0003124!7.93e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.99e-45;3!UBERON:0004054;6.99e-45;3!UBERON:0001000;1.84e-34;1!UBERON:0005352;1.84e-34;1!UBERON:0000998;4.27e-34;1!UBERON:0006868;4.27e-34;1!UBERON:0005904;5.50e-34;4!UBERON:0000058;2.75e-14;10!UBERON:0003135;4.38e-13;11!UBERON:0002110;2.45e-12;3!UBERON:0003124;3.06e-12;3!UBERON:0000920;3.06e-12;3!UBERON:0001052;1.63e-09;4!UBERON:0001242;1.63e-09;4!UBERON:0001262;1.63e-09;4!UBERON:0004786;1.63e-09;4!UBERON:0004808;1.63e-09;4!UBERON:0001277;1.63e-09;4!UBERON:0004907;7.25e-08;5!UBERON:0004175;2.56e-07;21!UBERON:0003101;5.01e-07;22!UBERON:0000079;5.01e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.25e-45,3;UBERON:0004054,6.25e-45,3;UBERON:0001000,1.84e-34,1;UBERON:0005352,1.84e-34,1;UBERON:0000998,3.61e-34,1;UBERON:0006868,3.61e-34,1;UBERON:0005904,5.06e-34,4;UBERON:0003135,4.25e-13,11;UBERON:0002110,2.59e-12,3;UBERON:0006242,2.59e-12,3;UBERON:0000920,3.24e-12,3;UBERON:0001052,1.57e-09,4;UBERON:0001242,1.57e-09,4;UBERON:0001262,1.57e-09,4;UBERON:0004786,1.57e-09,4;UBERON:0004808,1.57e-09,4;UBERON:0001277,1.57e-09,4;UBERON:0000058,5.35e-08,19;UBERON:0004907,7.01e-08,5;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22 | |||
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|short_description=p17@RHOBTB2 | |short_description=p17@RHOBTB2 | ||
}} | }} |
Latest revision as of 13:00, 17 September 2015
Short description: | p17@RHOBTB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RHOBTB2_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 18bp_to_ENST00000519685, NM_001160036, uc003xcp.2_5end |
EntrezGene: | RHOBTB2 |
HGNC: | 18756 |
UniProt: | E9PBU2A8K9Z8Q9BYZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 9.07e-18 | 2 |
epithelial cell of large intestine | 1.07e-17 | 2 |
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
intestinal epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.25e-45 | 3 |
internal male genitalia | 6.25e-45 | 3 |
vas deferens | 1.84e-34 | 1 |
spermatic cord | 1.84e-34 | 1 |
seminal vesicle | 3.61e-34 | 1 |
seminal fluid secreting gland | 3.61e-34 | 1 |
duct of male reproductive system | 5.06e-34 | 4 |
male reproductive organ | 4.25e-13 | 11 |
gallbladder | 2.59e-12 | 3 |
gall bladder primordium | 2.59e-12 | 3 |
egg chorion | 3.24e-12 | 3 |
rectum | 1.57e-09 | 4 |
intestinal mucosa | 1.57e-09 | 4 |
wall of intestine | 1.57e-09 | 4 |
gastrointestinal system mucosa | 1.57e-09 | 4 |
gastrointestinal system epithelium | 1.57e-09 | 4 |
intestinal epithelium | 1.57e-09 | 4 |
duct | 5.35e-08 | 19 |
lower digestive tract | 7.01e-08 | 5 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |