FFCP PHASE1:Hg19::chr9:131182697..131182748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51148 | |EntrezGene=51148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23723 | |HGNC=23723 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4B2 | |UniProt=Q5T4B2 | ||
|association_with_transcript=-10bp_to_ENST00000372838,NM_016174,uc004buz.3_5end | |association_with_transcript=-10bp_to_ENST00000372838,NM_016174,uc004buz.3_5end | ||
|cluster_id=chr9:131182697..131182748,+ | |||
|description=CAGE_peak_4_at_CERCAM_5end | |description=CAGE_peak_4_at_CERCAM_5end | ||
|id=chr9:131182697..131182748,+ | |id=chr9:131182697..131182748,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.07e-16!180;CL:0000057!8.17e-11!75;CL:0000220!4.98e-07!246;CL:0002321!9.41e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.07e-16!180;CL:0000057!8.17e-11!75;CL:0000220!4.98e-07!246;CL:0002321!9.41e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.50e-10;19!CL:0000134;1.94e-07;55!CL:0000723;8.76e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.75e-10,19;CL:0000057,1.15e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.15e-18!365;UBERON:0002100!2.88e-11!216;UBERON:0000483!2.69e-10!309;UBERON:0000468!4.26e-10!659;UBERON:0000119!6.17e-10!312;UBERON:0005631!3.72e-09!14;UBERON:0000158!3.72e-09!14;UBERON:0004111!5.38e-09!241;UBERON:0000481!2.43e-08!347;UBERON:0000478!1.14e-07!24;UBERON:0000467!1.78e-07!625;UBERON:0005256!2.19e-07!143;UBERON:0000477!2.82e-07!286;UBERON:0000480!2.85e-07!626;UBERON:0000025!3.20e-07!194;UBERON:0000914!4.89e-07!83;UBERON:0002329!4.89e-07!83;UBERON:0003077!4.89e-07!83;UBERON:0003059!4.89e-07!83;UBERON:0007282!4.89e-07!83;UBERON:0009618!4.89e-07!83;UBERON:0007285!4.89e-07!83;UBERON:0000486!7.00e-07!82 | |ontology_enrichment_uberon=UBERON:0000475!2.15e-18!365;UBERON:0002100!2.88e-11!216;UBERON:0000483!2.69e-10!309;UBERON:0000468!4.26e-10!659;UBERON:0000119!6.17e-10!312;UBERON:0005631!3.72e-09!14;UBERON:0000158!3.72e-09!14;UBERON:0004111!5.38e-09!241;UBERON:0000481!2.43e-08!347;UBERON:0000478!1.14e-07!24;UBERON:0000467!1.78e-07!625;UBERON:0005256!2.19e-07!143;UBERON:0000477!2.82e-07!286;UBERON:0000480!2.85e-07!626;UBERON:0000025!3.20e-07!194;UBERON:0000914!4.89e-07!83;UBERON:0002329!4.89e-07!83;UBERON:0003077!4.89e-07!83;UBERON:0003059!4.89e-07!83;UBERON:0007282!4.89e-07!83;UBERON:0009618!4.89e-07!83;UBERON:0007285!4.89e-07!83;UBERON:0000486!7.00e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.43e-09;24!UBERON:0005631;9.74e-09;10!UBERON:0000158;9.74e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.28e-11,14;UBERON:0000158,6.28e-11,14;UBERON:0000478,1.24e-08,24;UBERON:0004923,8.74e-08,66;UBERON:0006554,2.12e-07,47;UBERON:0000483,2.53e-07,306;UBERON:0002100,4.13e-07,199;UBERON:0001008,5.04e-07,48;UBERON:0000119,6.32e-07,309;UBERON:0003104,7.86e-07,160;UBERON:0009142,7.86e-07,160;UBERON:0004871,9.52e-07,8 | |||
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| ||
|short_description=p4@CERCAM | |short_description=p4@CERCAM | ||
}} | }} |
Latest revision as of 19:35, 15 September 2015
Short description: | p4@CERCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CERCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000372838, NM_016174, uc004buz.3_5end |
EntrezGene: | CERCAM |
HGNC: | 23723 |
UniProt: | Q5T4B2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.75e-10 | 19 |
fibroblast | 1.15e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.28e-11 | 14 |
membranous layer | 6.28e-11 | 14 |
extraembryonic structure | 1.24e-08 | 24 |
organ component layer | 8.74e-08 | 66 |
urinary system structure | 2.12e-07 | 47 |
epithelium | 2.53e-07 | 306 |
trunk | 4.13e-07 | 199 |
renal system | 5.04e-07 | 48 |
cell layer | 6.32e-07 | 309 |
mesenchyme | 7.86e-07 | 160 |
entire embryonic mesenchyme | 7.86e-07 | 160 |
somatic layer of lateral plate mesoderm | 9.52e-07 | 8 |