FFCP PHASE1:Hg19::chr17:1090590..1090595,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:1090590..1090595,-
|short_description=p35@ABR
|description=CAGE_peak_35_at_ABR_5end
|association_with_transcript=20bp_to_ENST00000544583,NM_001159746,uc00...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B3 | |UniProt=F5H8B3 | ||
|association_with_transcript=20bp_to_ENST00000544583,NM_001159746,uc002fse.2_5end | |||
|cluster_id=chr17:1090590..1090595,- | |||
|description=CAGE_peak_35_at_ABR_5end | |||
|id=chr17:1090590..1090595,- | |||
|ontology_enrichment_celltype=CL:0000147!5.47e-11!14;CL:0002586!9.25e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000150;1.12e-08;9!CL:0000148;6.13e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000150,1.04e-08,9;CL:0000148,5.73e-08,10;CL:0000541,5.73e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.04e-34;2!DOID:1287;8.69e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.04e-34,2;DOID:1287,8.69e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0003075!7.90e-32!86;UBERON:0007284!7.90e-32!86;UBERON:0001049!3.16e-31!57;UBERON:0005068!3.16e-31!57;UBERON:0006241!3.16e-31!57;UBERON:0007135!3.16e-31!57;UBERON:0002346!5.99e-30!90;UBERON:0005743!1.20e-29!86;UBERON:0002616!1.22e-27!59;UBERON:0003056!2.62e-26!61;UBERON:0000073!6.54e-26!94;UBERON:0001016!6.54e-26!94;UBERON:0000955!6.81e-26!69;UBERON:0006238!6.81e-26!69;UBERON:0001017!7.62e-24!82;UBERON:0001893!2.37e-23!34;UBERON:0002780!3.72e-23!41;UBERON:0001890!3.72e-23!41;UBERON:0006240!3.72e-23!41;UBERON:0002020!5.21e-23!34;UBERON:0003528!5.21e-23!34;UBERON:0007023!1.24e-22!115;UBERON:0003080!1.80e-22!42;UBERON:0000033!1.33e-21!123;UBERON:0002791!1.76e-21!33;UBERON:0000153!2.05e-21!129;UBERON:0007811!2.05e-21!129;UBERON:0001869!4.61e-20!32;UBERON:0002619!3.36e-18!22;UBERON:0001950!2.50e-17!20;UBERON:0000956!1.11e-15!25;UBERON:0000203!1.11e-15!25;UBERON:0004121!8.77e-14!169;UBERON:0000924!3.14e-13!173;UBERON:0006601!3.14e-13!173;UBERON:0002298!4.42e-11!8;UBERON:0000200!1.28e-10!6;UBERON:0003076!7.60e-10!15;UBERON:0003057!7.60e-10!15;UBERON:0004733!9.02e-10!12;UBERON:0002028!9.02e-10!12;UBERON:0007277!9.02e-10!12;UBERON:0002308!5.76e-09!9;UBERON:0000125!5.76e-09!9;UBERON:0004732!6.29e-09!13;UBERON:0000966!7.88e-09!5;UBERON:0005388!7.88e-09!5;UBERON:0001802!7.88e-09!5;UBERON:0001781!9.25e-09!3;UBERON:0001782!9.25e-09!3;UBERON:0005424!9.25e-09!3;UBERON:0000988!2.89e-08!3;UBERON:0007625!8.77e-08!11;UBERON:0006331!1.33e-07!3;UBERON:0000475!2.38e-07!365;UBERON:0002680!7.01e-07!9;UBERON:0001895!7.01e-07!9;UBERON:0010092!7.01e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;3.27e-23;3!UBERON:0002298;2.45e-12;6!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,4.09e-23,3;UBERON:0002298,2.74e-12,6;UBERON:0002680,1.21e-08,9;UBERON:0001895,1.21e-08,9;UBERON:0010092,1.21e-08,9;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0.381988425558278,0,0,0.719792448923265,0,1.42913216315289,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.441280633457501,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28767814440971,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0.886068179966986,0,0.1251909307065,0,0.554645257684261,0.683060432355218,0,0,0.606596470166591,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.638535436228605,0.41023272848151,0,0.691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.675375846183947,0,0.206686796501184,0.697573912132975,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,1.08751572762931,0.72350050919134,0,0,0,0.471346769748006,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0.381988425558278,0,0,0.719792448923265,0,1.42913216315289,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.441280633457501,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28767814440971,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0.886068179966986,0,0.1251909307065,0,0.554645257684261,0.683060432355218,0,0,0.606596470166591,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.638535436228605,0.41023272848151,0,0.691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.675375846183947,0,0.206686796501184,0.697573912132975,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,1.08751572762931,0.72350050919134,0,0,0,0.471346769748006,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p35@ABR | |||
}} | }} |
Latest revision as of 15:40, 18 September 2015
Short description: | p35@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_ABR_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000544583, NM_001159746, uc002fse.2_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | F5H8B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glandular epithelial cell | 1.04e-08 | 9 |
melanocyte | 5.73e-08 | 10 |
melanoblast | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
pons | 4.09e-23 | 3 |
brainstem | 2.74e-12 | 6 |
regional part of metencephalon | 1.21e-08 | 9 |
metencephalon | 1.21e-08 | 9 |
future metencephalon | 1.21e-08 | 9 |
segmental subdivision of hindbrain | 8.38e-07 | 12 |
hindbrain | 8.38e-07 | 12 |
presumptive hindbrain | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.04e-34 | 2 |
cardiovascular system disease | 8.69e-18 | 4 |