FFCP PHASE1:Hg19::chr20:62205570..62205609,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85441 | |EntrezGene=85441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYK8,Q4VXQ0 | |UniProt=Q9BYK8,Q4VXQ0 | ||
|association_with_transcript=0bp_to_ENST00000370082,ENST00000479540,NM_001037335,uc002yfm.2,uc002yfn.2_5end | |association_with_transcript=0bp_to_ENST00000370082,ENST00000479540,NM_001037335,uc002yfm.2,uc002yfn.2_5end | ||
|cluster_id=chr20:62205570..62205609,- | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_PRIC285_5end | |description=CAGE_peak_1_at_PRIC285_5end | ||
|id=chr20:62205570..62205609,- | |id=chr20:62205570..62205609,- | ||
|ontology_enrichment_celltype=CL:0002057!1.11e-17!42;CL:0000860!2.46e-16!45;CL:0000738!2.84e-14!140;CL:0002031!8.04e-13!124;CL:0002087!1.64e-12!119;CL:0000766!1.68e-12!76;CL:0000557!6.83e-10!71;CL:0002009!4.77e-09!65;CL:0002194!1.81e-08!63;CL:0000576!1.81e-08!63;CL:0000040!1.81e-08!63;CL:0000559!1.81e-08!63;CL:0000839!2.94e-08!70 | |ontology_enrichment_celltype=CL:0002057!1.11e-17!42;CL:0000860!2.46e-16!45;CL:0000738!2.84e-14!140;CL:0002031!8.04e-13!124;CL:0002087!1.64e-12!119;CL:0000766!1.68e-12!76;CL:0000557!6.83e-10!71;CL:0002009!4.77e-09!65;CL:0002194!1.81e-08!63;CL:0000576!1.81e-08!63;CL:0000040!1.81e-08!63;CL:0000559!1.81e-08!63;CL:0000839!2.94e-08!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-13;33!CL:0002057;1.04e-13;33!CL:0000473;1.49e-08;39!CL:0000234;1.49e-08;39!CL:0000576;3.21e-08;48!CL:0000766;3.58e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-17,42;CL:0002057,1.11e-17,42;CL:0000738,5.11e-15,136;CL:0000473,1.34e-13,48;CL:0000234,1.34e-13,48;CL:0000766,1.39e-13,72;CL:0002031,1.42e-13,120;CL:0002087,2.84e-13,115;CL:0000557,7.88e-11,67;CL:0002009,5.56e-10,61;CL:0002194,2.25e-09,59;CL:0000576,2.25e-09,59;CL:0000040,2.25e-09,59;CL:0000559,2.25e-09,59;CL:0000839,4.53e-09,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.23e-15!112;UBERON:0002390!4.84e-14!102;UBERON:0003061!4.84e-14!102;UBERON:0003081!3.39e-10!216;UBERON:0002405!5.18e-10!115;UBERON:0002371!3.55e-08!80;UBERON:0000178!7.49e-07!15;UBERON:0000179!7.49e-07!15;UBERON:0000463!7.49e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!7.23e-15!112;UBERON:0002390!4.84e-14!102;UBERON:0003061!4.84e-14!102;UBERON:0003081!3.39e-10!216;UBERON:0002405!5.18e-10!115;UBERON:0002371!3.55e-08!80;UBERON:0000178!7.49e-07!15;UBERON:0000179!7.49e-07!15;UBERON:0000463!7.49e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.47e-07;15!UBERON:0000179;6.47e-07;15!UBERON:0000463;6.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.88e-16,108;UBERON:0002390,5.59e-15,98;UBERON:0003061,5.59e-15,98;UBERON:0002405,4.88e-11,93;UBERON:0003081,5.91e-09,203;UBERON:0002371,6.68e-09,76;UBERON:0001474,2.93e-07,82;UBERON:0004765,3.66e-07,90;UBERON:0000178,7.49e-07,15;UBERON:0000179,7.49e-07,15;UBERON:0000463,7.49e-07,15 | |||
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| ||
|short_description=p1@PRIC285 | |short_description=p1@PRIC285 | ||
}} | }} |
Latest revision as of 13:34, 17 September 2015
Short description: | p1@PRIC285 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRIC285_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000370082, ENST00000479540, NM_001037335, uc002yfm.2, uc002yfn.2_5end |
EntrezGene: | PRIC285 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.11e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-17 | 42 |
leukocyte | 5.11e-15 | 136 |
defensive cell | 1.34e-13 | 48 |
phagocyte | 1.34e-13 | 48 |
myeloid leukocyte | 1.39e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 1.42e-13 | 120 |
nongranular leukocyte | 2.84e-13 | 115 |
granulocyte monocyte progenitor cell | 7.88e-11 | 67 |
macrophage dendritic cell progenitor | 5.56e-10 | 61 |
monopoietic cell | 2.25e-09 | 59 |
monocyte | 2.25e-09 | 59 |
monoblast | 2.25e-09 | 59 |
promonocyte | 2.25e-09 | 59 |
myeloid lineage restricted progenitor cell | 4.53e-09 | 66 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.88e-16 | 108 |
hematopoietic system | 5.59e-15 | 98 |
blood island | 5.59e-15 | 98 |
immune system | 4.88e-11 | 93 |
lateral plate mesoderm | 5.91e-09 | 203 |
bone marrow | 6.68e-09 | 76 |
bone element | 2.93e-07 | 82 |
skeletal element | 3.66e-07 | 90 |
blood | 7.49e-07 | 15 |
haemolymphatic fluid | 7.49e-07 | 15 |
organism substance | 7.49e-07 | 15 |