FFCP PHASE1:Hg19::chr21:45304270..45304310,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:45304270..45304310,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr21:45304270..45304310,+ | |description=CAGE_peak_at_chr21:45304270..45304310,+ | ||
|id=chr21:45304270..45304310,+ | |id=chr21:45304270..45304310,+ | ||
|ontology_enrichment_celltype=CL:0000763!8.41e-11!112;CL:0000049!8.41e-11!112;CL:0000037!1.43e-10!172;CL:0000566!1.43e-10!172;CL:0000988!2.32e-09!182;CL:0002032!1.24e-08!165;CL:0000837!1.24e-08!165;CL:0000775!3.59e-07!3 | |ontology_enrichment_celltype=CL:0000763!8.41e-11!112;CL:0000049!8.41e-11!112;CL:0000037!1.43e-10!172;CL:0000566!1.43e-10!172;CL:0000988!2.32e-09!182;CL:0002032!1.24e-08!165;CL:0000837!1.24e-08!165;CL:0000775!3.59e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.33e-13;2!CL:0000558;1.33e-13;2!CL:0000775;2.87e-09;3!CL:0000226;9.65e-09;3!CL:0000842;9.65e-09;3!CL:0000094;2.11e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.33e-13,2;CL:0000765,1.33e-13,2;CL:0000050,1.33e-13,2;CL:0000038,1.33e-13,2;CL:0000558,1.33e-13,2;CL:0000547,1.33e-13,2;CL:0000549,1.33e-13,2;CL:0000550,1.33e-13,2;CL:0000552,1.33e-13,2;CL:0000775,2.87e-09,3;CL:0000226,9.28e-09,3;CL:0000842,9.28e-09,3;CL:0000094,2.20e-07,8;CL:0000037,8.71e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.35e-08!8 | |ontology_enrichment_disease=DOID:1036!1.35e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.67e-12;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.56e-12,8;DOID:1240,9.69e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.34e-19!15;UBERON:0000179!8.34e-19!15;UBERON:0000463!8.34e-19!15;UBERON:0007023!1.18e-12!115;UBERON:0002390!2.51e-10!102;UBERON:0003061!2.51e-10!102;UBERON:0002193!2.21e-09!112 | |ontology_enrichment_uberon=UBERON:0000178!8.34e-19!15;UBERON:0000179!8.34e-19!15;UBERON:0000463!8.34e-19!15;UBERON:0007023!1.18e-12!115;UBERON:0002390!2.51e-10!102;UBERON:0003061!2.51e-10!102;UBERON:0002193!2.21e-09!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.07e-49;15!UBERON:0000179;8.07e-49;15!UBERON:0000463;8.07e-49;15!UBERON:0002390;1.17e-24;32!UBERON:0002193;7.83e-13;42!UBERON:0000996;3.61e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.73e-49,15;UBERON:0000179,7.73e-49,15;UBERON:0000463,7.73e-49,15;UBERON:0000996,2.66e-07,1;UBERON:0002390,7.96e-07,98;UBERON:0003061,7.96e-07,98 | |||
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| ||
|short_description=p@chr21:45304270..45304310,+ | |short_description=p@chr21:45304270..45304310,+ | ||
}} | }} |
Latest revision as of 18:22, 28 July 2015
Short description: | p@chr21:45304270..45304310, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:45304270..45304310, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.33e-13 | 2 |
erythroblast | 1.33e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 1.33e-13 | 2 |
erythroid progenitor cell | 1.33e-13 | 2 |
reticulocyte | 1.33e-13 | 2 |
proerythroblast | 1.33e-13 | 2 |
basophilic erythroblast | 1.33e-13 | 2 |
polychromatophilic erythroblast | 1.33e-13 | 2 |
orthochromatic erythroblast | 1.33e-13 | 2 |
neutrophil | 2.87e-09 | 3 |
single nucleate cell | 9.28e-09 | 3 |
mononuclear cell | 9.28e-09 | 3 |
granulocyte | 2.20e-07 | 8 |
hematopoietic stem cell | 8.71e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 7.73e-49 | 15 |
haemolymphatic fluid | 7.73e-49 | 15 |
organism substance | 7.73e-49 | 15 |
vagina | 2.66e-07 | 1 |
hematopoietic system | 7.96e-07 | 98 |
blood island | 7.96e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.56e-12 | 8 |
leukemia | 9.69e-07 | 39 |