FFCP PHASE1:Hg19::chr17:39845818..39845871,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:39845818..39845871,+
|short_description=p3@EIF1
|description=CAGE_peak_3_at_EIF1_5end
|association_with_transcript=77bp_to_ENST00000479972_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10209 | |EntrezGene=10209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3249 | |HGNC=3249 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=77bp_to_ENST00000479972_5end | |||
|cluster_id=chr17:39845818..39845871,+ | |||
|description=CAGE_peak_3_at_EIF1_5end | |||
|id=chr17:39845818..39845871,+ | |||
|ontology_enrichment_celltype=CL:0000012!7.18e-23!682;CL:0000548!1.61e-22!679;CL:0000004!1.61e-22!679;CL:0000255!1.61e-22!679;CL:0000003!1.10e-17!722;CL:0000063!3.10e-17!578;CL:0000144!7.06e-15!625;CL:0002057!5.19e-14!42;CL:0000860!3.57e-13!45;CL:0002371!1.31e-11!591;CL:0000134!4.00e-09!358;CL:0002320!4.90e-09!365;CL:0000219!5.16e-09!390;CL:0000034!3.61e-08!444;CL:0000766!6.00e-08!76;CL:0000048!7.48e-08!430;CL:0000723!8.64e-08!436;CL:0000057!2.52e-07!75;CL:0000839!7.13e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-09;33!CL:0002057;1.97e-09;33!CL:0000576;7.78e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.49e-16,42;CL:0002057,3.49e-16,42;CL:0000473,9.94e-13,48;CL:0000234,9.94e-13,48;CL:0000134,3.01e-11,354;CL:0002320,5.28e-11,361;CL:0000766,2.44e-10,72;CL:0000219,9.45e-10,386;CL:0000839,4.58e-09,66;CL:0000034,5.05e-09,441;CL:0000723,8.40e-09,433;CL:0000048,1.19e-08,427;CL:0002194,3.61e-08,59;CL:0000576,3.61e-08,59;CL:0000040,3.61e-08,59;CL:0000559,3.61e-08,59;CL:0000557,3.68e-08,67;CL:0002009,3.84e-08,61;CL:0002393,2.30e-07,9;CL:0002397,2.30e-07,9;CL:0000057,3.62e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;5.52e-11;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.03e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.90e-10,371;UBERON:0002371,1.06e-07,76;UBERON:0001474,1.26e-07,82;UBERON:0004765,2.47e-07,90;UBERON:0001434,5.20e-07,100 | |||
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| ||
|short_description=p3@EIF1 | |||
}} | }} |
Latest revision as of 06:58, 20 September 2015
Short description: | p3@EIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENST00000479972_5end |
EntrezGene: | EIF1 |
HGNC: | 3249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.49e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.49e-16 | 42 |
defensive cell | 9.94e-13 | 48 |
phagocyte | 9.94e-13 | 48 |
mesenchymal cell | 3.01e-11 | 354 |
connective tissue cell | 5.28e-11 | 361 |
myeloid leukocyte | 2.44e-10 | 72 |
motile cell | 9.45e-10 | 386 |
myeloid lineage restricted progenitor cell | 4.58e-09 | 66 |
stem cell | 5.05e-09 | 441 |
somatic stem cell | 8.40e-09 | 433 |
multi fate stem cell | 1.19e-08 | 427 |
monopoietic cell | 3.61e-08 | 59 |
monocyte | 3.61e-08 | 59 |
monoblast | 3.61e-08 | 59 |
promonocyte | 3.61e-08 | 59 |
granulocyte monocyte progenitor cell | 3.68e-08 | 67 |
macrophage dendritic cell progenitor | 3.84e-08 | 61 |
intermediate monocyte | 2.30e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.30e-07 | 9 |
fibroblast | 3.62e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.90e-10 | 371 |
bone marrow | 1.06e-07 | 76 |
bone element | 1.26e-07 | 82 |
skeletal element | 2.47e-07 | 90 |
skeletal system | 5.20e-07 | 100 |