FFCP PHASE1:Hg19::chr17:40824261..40824307,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:40824261..40824307,-
|short_description=p6@PLEKHH3
|description=CAGE_peak_6_at_PLEKHH3_5end
|association_with_transcript=102bp_to_uc010cyl.1_5end
|Entrez...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79990 | |EntrezGene=79990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=26105 | |HGNC=26105 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=102bp_to_uc010cyl.1_5end | |||
|cluster_id=chr17:40824261..40824307,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_6_at_PLEKHH3_5end | |||
|id=chr17:40824261..40824307,- | |||
|ontology_enrichment_celltype=CL:0002322!2.04e-12!5;CL:0000039!8.54e-09!7;CL:0000586!8.54e-09!7;CL:0002327!2.33e-08!4;CL:0000066!5.56e-08!254;CL:0002159!5.02e-07!13;CL:0002231!8.22e-07!3;CL:0002077!9.99e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.22e-66;5!CL:0000039;6.32e-48;7!CL:0000586;6.32e-48;7!CL:0002321;4.24e-22;15!CL:0000540;3.60e-20;6!CL:0000404;3.60e-20;6!CL:0000148;1.20e-12;10!CL:0000147;3.39e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.76e-66,5;CL:0000039,6.33e-48,7;CL:0000586,6.33e-48,7;CL:0000540,2.96e-20,6;CL:0000031,2.96e-20,6;CL:0000404,2.96e-20,6;CL:0000047,2.31e-15,8;CL:0000148,1.13e-12,10;CL:0000541,1.13e-12,10;CL:0000147,3.25e-09,14;CL:0000133,1.62e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.74e-22;10!UBERON:0005564;6.74e-22;10!CL:0000031;3.60e-20;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.56e-15;22!DOID:2994;2.56e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.56e-15,22;DOID:2994,2.56e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0003101!1.37e-13!22;UBERON:0000079!1.37e-13!22;UBERON:0000473!5.26e-10!8;UBERON:0003135!3.04e-09!11;UBERON:0001911!2.33e-08!4;UBERON:0005333!2.33e-08!4;UBERON:0008425!2.33e-08!4;UBERON:0005311!2.33e-08!4;UBERON:0003937!1.50e-07!12;UBERON:0005399!1.50e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.85e-27;8!UBERON:0003135;6.10e-20;11!UBERON:0000922;2.17e-13;49!UBERON:0000991;1.39e-10;21!UBERON:0003101;4.10e-10;22!UBERON:0000079;4.10e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.85e-27,8;UBERON:0003135,6.10e-20,11;UBERON:0000991,1.39e-10,21;UBERON:0009196,1.39e-10,21;UBERON:0009117,1.39e-10,21;UBERON:0005564,1.39e-10,21;UBERON:0004176,4.10e-10,22;UBERON:0003101,4.10e-10,22;UBERON:0000079,4.10e-10,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,2.80539524098069,1.59035721985782,1.85910308591229,4.25010325563019,6.30802127189071,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,1.02090169995667,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,3.91958637459702,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,1.44677833618517,1.92555211236127,1.66176135211674,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0.0657727735628491,0,0.111231401892069,0.39246546425257,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.6828739083758,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,4.9974526573571,10.6886962106224,14.4274992269707,2.25636785363138,0.0757786982182394,0,0,0,0.639701945702943,0,0.129177819672012,0,0,0,0.202117188958219,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,2.80539524098069,1.59035721985782,1.85910308591229,4.25010325563019,6.30802127189071,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,1.02090169995667,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,3.91958637459702,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,1.44677833618517,1.92555211236127,1.66176135211674,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0.0657727735628491,0,0.111231401892069,0.39246546425257,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.6828739083758,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,4.9974526573571,10.6886962106224,14.4274992269707,2.25636785363138,0.0757786982182394,0,0,0,0.639701945702943,0,0.129177819672012,0,0,0,0.202117188958219,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@PLEKHH3 | |||
}} | }} |
Latest revision as of 15:28, 24 September 2015
Short description: | p6@PLEKHH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLEKHH3_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 102bp_to_uc010cyl.1_5end |
EntrezGene: | PLEKHH3 |
HGNC: | 26105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.76e-66 | 5 |
germ line cell | 6.33e-48 | 7 |
germ cell | 6.33e-48 | 7 |
neuron | 2.96e-20 | 6 |
neuroblast | 2.96e-20 | 6 |
electrically signaling cell | 2.96e-20 | 6 |
neuronal stem cell | 2.31e-15 | 8 |
melanocyte | 1.13e-12 | 10 |
melanoblast | 1.13e-12 | 10 |
pigment cell | 3.25e-09 | 14 |
neurectodermal cell | 1.62e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 2.85e-27 | 8 |
male reproductive organ | 6.10e-20 | 11 |
gonad | 1.39e-10 | 21 |
indifferent external genitalia | 1.39e-10 | 21 |
indifferent gonad | 1.39e-10 | 21 |
gonad primordium | 1.39e-10 | 21 |
external genitalia | 4.10e-10 | 22 |
male organism | 4.10e-10 | 22 |
male reproductive system | 4.10e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.56e-15 | 22 |
germ cell cancer | 2.56e-15 | 22 |