FFCP PHASE1:Hg19::chr13:46550133..46550137,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23091 | |EntrezGene=23091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20368 | |HGNC=20368 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T200 | |UniProt=Q5T200 | ||
|association_with_transcript=-360bp_to_AB020660_5end | |association_with_transcript=-360bp_to_AB020660_5end | ||
|cluster_id=chr13:46550133..46550137,- | |||
|description=CAGE_peak_39_at_ZC3H13_5end | |description=CAGE_peak_39_at_ZC3H13_5end | ||
|id=chr13:46550133..46550137,- | |id=chr13:46550133..46550137,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.94e-14;10!DOID:3095;7.17e-07;22!DOID:2994;7.17e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.85e-14,10;DOID:3095,7.03e-07,22;DOID:2994,7.03e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.06e-15!41;UBERON:0001890!1.06e-15!41;UBERON:0006240!1.06e-15!41;UBERON:0001049!1.29e-15!57;UBERON:0005068!1.29e-15!57;UBERON:0006241!1.29e-15!57;UBERON:0007135!1.29e-15!57;UBERON:0003080!4.24e-15!42;UBERON:0002020!8.31e-14!34;UBERON:0003528!8.31e-14!34;UBERON:0001869!1.61e-12!32;UBERON:0002616!1.81e-12!59;UBERON:0001893!2.03e-12!34;UBERON:0002791!9.96e-12!33;UBERON:0000955!2.30e-11!69;UBERON:0006238!2.30e-11!69;UBERON:0000956!2.93e-10!25;UBERON:0000203!2.93e-10!25;UBERON:0002619!1.77e-09!22;UBERON:0001017!2.07e-09!82;UBERON:0002346!3.33e-09!90;UBERON:0003056!5.38e-09!61;UBERON:0003075!1.74e-08!86;UBERON:0007284!1.74e-08!86;UBERON:0005743!1.77e-08!86;UBERON:0000073!4.93e-08!94;UBERON:0001016!4.93e-08!94;UBERON:0001950!1.08e-07!20;UBERON:0000153!1.71e-07!129;UBERON:0007811!1.71e-07!129;UBERON:0007023!3.52e-07!115;UBERON:0000033!4.78e-07!123 | |ontology_enrichment_uberon=UBERON:0002780!1.06e-15!41;UBERON:0001890!1.06e-15!41;UBERON:0006240!1.06e-15!41;UBERON:0001049!1.29e-15!57;UBERON:0005068!1.29e-15!57;UBERON:0006241!1.29e-15!57;UBERON:0007135!1.29e-15!57;UBERON:0003080!4.24e-15!42;UBERON:0002020!8.31e-14!34;UBERON:0003528!8.31e-14!34;UBERON:0001869!1.61e-12!32;UBERON:0002616!1.81e-12!59;UBERON:0001893!2.03e-12!34;UBERON:0002791!9.96e-12!33;UBERON:0000955!2.30e-11!69;UBERON:0006238!2.30e-11!69;UBERON:0000956!2.93e-10!25;UBERON:0000203!2.93e-10!25;UBERON:0002619!1.77e-09!22;UBERON:0001017!2.07e-09!82;UBERON:0002346!3.33e-09!90;UBERON:0003056!5.38e-09!61;UBERON:0003075!1.74e-08!86;UBERON:0007284!1.74e-08!86;UBERON:0005743!1.77e-08!86;UBERON:0000073!4.93e-08!94;UBERON:0001016!4.93e-08!94;UBERON:0001950!1.08e-07!20;UBERON:0000153!1.71e-07!129;UBERON:0007811!1.71e-07!129;UBERON:0007023!3.52e-07!115;UBERON:0000033!4.78e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0003112;1.53e-16;1!UBERON:0011158;1.53e-16;1!UBERON:0003128;1.53e-16;1!UBERON:0001703;1.53e-16;1!UBERON:0002241;1.53e-16;1!UBERON:0002346;2.17e-16;4!UBERON:0000923;2.17e-16;4!UBERON:0010316;2.17e-16;4!UBERON:0005291;2.17e-16;4!UBERON:0002784;3.58e-16;4!UBERON:0002050;2.60e-13;5!UBERON:0005423;2.60e-13;5!UBERON:0001894;1.18e-09;7!UBERON:0002771;6.17e-09;2!UBERON:0001897;6.17e-09;2!UBERON:0001905;6.17e-09;2!UBERON:0002757;6.17e-09;2!UBERON:0010134;6.17e-09;2!UBERON:0005408;6.17e-09;2!UBERON:0010225;6.17e-09;2!UBERON:0001899;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003112,1.04e-16,1;UBERON:0011158,1.04e-16,1;UBERON:0003128,1.04e-16,1;UBERON:0001703,1.04e-16,1;UBERON:0002241,1.04e-16,1;UBERON:0004761,1.04e-16,1;UBERON:0009617,1.04e-16,1;UBERON:0002784,3.87e-16,4;UBERON:0001894,1.24e-09,7;UBERON:0006222,1.24e-09,7;UBERON:0001897,4.70e-09,2;UBERON:0010225,4.70e-09,2;UBERON:0005253,5.08e-09,2;UBERON:0002771,7.49e-09,2;UBERON:0001905,8.74e-09,2;UBERON:0002757,8.74e-09,2;UBERON:0010134,8.74e-09,2;UBERON:0005408,8.74e-09,2;UBERON:0001899,8.74e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0,0.852449501065388,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.390178042679635,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.61417158655884,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.514137463516618,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.54941678891006,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0.318852545457645,0.59873811429845,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0.605399121573143,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0.422250816255987,0,0,0.503865495708552,0,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0.723578631752448,0,0.663475559587348,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0.593042257361244,0.247127877893006,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,1.19472429772959,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.253243183823515,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0.0846733320657845,0.795229689809303,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0.244052529803926,0.751145584238999,0,0.110929051536852,0,0.415045904808692,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,1.10606748921385,0,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,1.10086159299127,0,0,2.97604888142356,1.61116493536703,0,0,0.157723490002507,0,0,0,0.128458450192919,2.8339315265117,0.478901577171454,0.205116364240755,0,0.0691572524642179,1.29180516505481,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0,0.270150338473579,0,0.826747186004736,0.0634158101939068,0,0,0.496211178389294,0,0,0,1.00885116665647,0.606965604236632,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.942693539496011,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0.329821550236287,0,0,0,0.470317296361523,0.245148321753905,0,0.588925401344836,0.297046400327086,0,0,0,0,0.0999411559249289,0.357107877211315,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,0.829169439458779,1.55149493792843,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0,0.852449501065388,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.390178042679635,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.61417158655884,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.514137463516618,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.54941678891006,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0.318852545457645,0.59873811429845,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0.605399121573143,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0.422250816255987,0,0,0.503865495708552,0,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0.723578631752448,0,0.663475559587348,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0.593042257361244,0.247127877893006,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,1.19472429772959,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.253243183823515,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0.0846733320657845,0.795229689809303,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0.244052529803926,0.751145584238999,0,0.110929051536852,0,0.415045904808692,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,1.10606748921385,0,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,1.10086159299127,0,0,2.97604888142356,1.61116493536703,0,0,0.157723490002507,0,0,0,0.128458450192919,2.8339315265117,0.478901577171454,0.205116364240755,0,0.0691572524642179,1.29180516505481,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0.163771917510097,0,0.270150338473579,0,0.826747186004736,0.0634158101939068,0,0,0.496211178389294,0,0,0,1.00885116665647,0.606965604236632,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.942693539496011,0,0,0,0.47775168788705,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0.329821550236287,0,0,0,0.470317296361523,0.245148321753905,0,0.588925401344836,0.297046400327086,0,0,0,0,0.0999411559249289,0.357107877211315,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,0,0.267964130156178,0.829169439458779,1.55149493792843,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p39@ZC3H13 | |short_description=p39@ZC3H13 | ||
}} | }} |
Latest revision as of 12:52, 17 September 2015
Short description: | p39@ZC3H13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_ZC3H13_5end |
Coexpression cluster: | NA |
Association with transcript: | -360bp_to_AB020660_5end |
EntrezGene: | ZC3H13 |
HGNC: | 20368 |
UniProt: | Q5T200 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
olfactory region | 1.04e-16 | 1 |
primary subdivision of skull | 1.04e-16 | 1 |
cranium | 1.04e-16 | 1 |
neurocranium | 1.04e-16 | 1 |
chondrocranium | 1.04e-16 | 1 |
cartilaginous neurocranium | 1.04e-16 | 1 |
head paraxial mesoderm | 1.04e-16 | 1 |
regional part of diencephalon | 3.87e-16 | 4 |
diencephalon | 1.24e-09 | 7 |
future diencephalon | 1.24e-09 | 7 |
dorsal plus ventral thalamus | 4.70e-09 | 2 |
thalamic complex | 4.70e-09 | 2 |
head mesenchyme | 5.08e-09 | 2 |
middle temporal gyrus | 7.49e-09 | 2 |
pineal body | 8.74e-09 | 2 |
regional part of epithalamus | 8.74e-09 | 2 |
secretory circumventricular organ | 8.74e-09 | 2 |
circumventricular organ | 8.74e-09 | 2 |
epithalamus | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.85e-14 | 10 |
germ cell and embryonal cancer | 7.03e-07 | 22 |
germ cell cancer | 7.03e-07 | 22 |